Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2031 ATGAGAGATGAAAACTTCAAGAAAAGCAAGCTTTCATGGCCAAAAACTTTGGTTAAGAAATGGTTCAATATTAAGAGTAAAGCTGAAGATTTTCAAGCAGATGATGATGATGTTCTTTATGGAGGTGTTGATGAAGAGTGGAGGAACAACTATTCAAAGAGAGAAGAATGCACTAACAAGAAAAGCAAAACAGAAAGAACAAAGAGAAGACACTCGGAAAGAACGCGGCGATGTAAGATTGATCACGATGCAGCTCAGGTTACAGATGTGAATAATTATAGAATCTTTGCCGCGACTTGGAATGTAGCCGGAAGATCTCCTCCAAGTTATTTGAATCTCGAAGATTGGCTTCATACTTCTCCACCTGCTGATATTTATGTTCTTGGGTTTCAAGAGATTGTACCTCTCAATGCTGGAAATGTTTTGGGGACAGAAGACAACGGTCCTGCTAGAAAATGGCTAGCTCTTATACGGAAGACACTGAATAGTCTTCCCGGAACAAGTGGTGAATGCCATACTAATTCACCTTTTCCAGATCCTGTTGTAGAGTTAGATTCTGATTTTGAGGGATCAATGAGGCAGAAGGCTACCTCTTTCTTCCATCGAAGGTCGTTCCAATCTTTGAGTCATAGTATGAGAATGGACAATGACTTGTTAGTGCCACAGGCATGCCTCGATCGCCGTTTCAGCGTCTGTGATAGAATGATATTTGGTCATAGCGCAGGTGACTATGACCCTAATTATAGATGGGGGTCCTCAGATGACGAAAACGGTGAATCTCCTGTTATATCACAGTATTCACCAATGTCGTATAGAGGGTTTGCCTCTATGGAGGATAGAGATAGACAAACAGATAACTCGAGATATTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATTTTTCTAACTGTTTGGGTTAAAAGCAATATAAGAGACGATGTTCGCAACATGAAAGTGTCTTGTGTTGGCAGAGGGTTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACAAAACAAGCTTTTGCTTCATATGTAGTCATTTGACTTCTGGACAAAAGGAGGGTGATGAGCTAAGGAGAAATTCAGATGTAATGGAGATTCTTAGAAAGACGAGGTTTCCTCGAGTAAATGGCATTGGTGATGAGAGTTCTCCTCAGACTATTCTGGACCATGATCGAATAATTTGGCTGGGAGATTTAAATTATCGGATAGCCCTTACTTACCGTGCGGCAAAAGCACTTGTTGAGATGCATAATTGGAAGGTACTGTTAGAGAATGACCAGCTGCATATAGAACGAGAACAAGGTCGTGTCTTTGAAGGATGGAATGAGGGGCAAATATACTTCCCTCCCACGTACAAGTATTCAAACAATTCGGACAGATATGCAGGCGATGAAAGACAGTCAAAACAAAAGAGAAGAACTCCGGCGTGGTGTGATCGGATCTTATGGTATGGAAGAGGCCTCCGCCAATTATCTTATGTTCGTGGGGAATCAAGATTCTCCGATCATAGACCAGTTTGTAGTGTATTCTTAGCAGAAGTCGAGTCTGTTAGCCGTAACCGAATCAGAAAATGCTCTAGTTGCTCCAGTTCAAGGGTTGAAGTAGAAGAGTTGTTGCCTCATTCACATGGCTACAATTATACCGATTTAACATTCTATTGA 1683 0.4118 MRDENFKKSKLSWPKTLVKKWFNIKSKAEDFQADDDDVLYGGVDEEWRNNYSKREECTNKKSKTERTKRRHSERTRRCKIDHDAAQVTDVNNYRIFAATWNVAGRSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTNSPFPDPVVELDSDFEGSMRQKATSFFHRRSFQSLSHSMRMDNDLLVPQACLDRRFSVCDRMIFGHSAGDYDPNYRWGSSDDENGESPVISQYSPMSYRGFASMEDRDRQTDNSRYCLVASKQMVGIFLTVWVKSNIRDDVRNMKVSCVGRGLMGYLGNKGSISISMSLHKTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVNGIGDESSPQTILDHDRIIWLGDLNYRIALTYRAAKALVEMHNWKVLLENDQLHIEREQGRVFEGWNEGQIYFPPTYKYSNNSDRYAGDERQSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVCSVFLAEVESVSRNRIRKCSSCSSSRVEVEELLPHSHGYNYTDLTFY* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2031 560 SMART i5p_5 214 525 IPR000300 GO:0016791|GO:0046856
Tpr1g2031 560 Pfam Endonuclease/Exonuclease/phosphatase family 98 510 IPR005135 GO:0003824
Tpr1g2031 560 Gene3D Endonuclease/exonuclease/phosphatase 72 213 IPR036691 -
Tpr1g2031 560 Gene3D Endonuclease/exonuclease/phosphatase 254 545 IPR036691 -
Tpr1g2031 560 SUPERFAMILY DNase I-like 83 534 IPR036691 -
Tpr1g2031 560 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 556 IPR045849 GO:0004445|GO:0046855
Tpr1g2031 560 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2031 Tpr-Chr1 20873267 20877313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2031 285 524 Acyl Lipid Metabolism Gene Families AT1G65580 30.035 2.09e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2031 - - gmx:100788764 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3535 6 38317751 38322294 Tpr1g2031 1 20873267 20877313 PCT