Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1224 ATGAATTTCTTCAAATCCGTTTTCTCAGACGATCCAGATCCACTTCAACCCGAATCCCAACCCGAATCCAACAATGCTGACCCGATTCCCGATTCCGCCGGCGCCGACGACACTTGGAACTTCGGCGGACTCATCAAAACCCTCACAGCCAAATCCGAATCCATAATCGAAACCTACCGTCGCGATCTACAGGAATTCAGCACTGGATTGAAGAACGAGATCGAGGTTGCTCAAGATTCAGTTGGTGAGATCGGAAGCACCGTCATCAAAGGAACGGCTCAGATCATATCTCAAGGTAAGGAAGCAATCCTCGCCGTTAATCTCGATTCCGATAATGCCACTGCCACCACCACCGCCACTGCTAATCGCGATTCGAATAGCTTAGATTCGAAGCGATATAGTAGGTTTGATGCTCAGATTAGTGCAATTCAGAGTGATGTTGGGACTTACACTGAGGTACCTGAGGATTTGGGTGAATTCAATGAGTGGAAATTAGGGTTTGTGTTGGATGGGAAAAGTGATGAAATGGAGAGTCTTTTTAGGGAGAATGATGTAATGGAGAGTGTTTATAAAAGGATTGTTCCAAATAGTATTGATCATGAAACTTTTTGGTATAGGTATTATTATAAGGTTTATAGGCTTAAGAAAGCTGAAGATGTTAGGGCTAAGCTTGTTAGAAGAATATCTAAGGATGAAGAGGATTTGAGTTGGGATGTTGAAGATGAGGACGATGACGATGATAGTGTGGCGGAGAAGGAGAAGAAGCATGAAGGTGAAAATTTGGGGAAAAGTGTCGATACTGATTTGAACATTGGTGCATCTAGCTCTGGTTCTAGTGATGAGAAGAGATTGAGTGTGGAAGAGGTGAAACATTCAGAGTCTAAAGAAGAAGAGAGAGATGATTCAATGCAAACTAATGAACTTGGTAATGAGATGGGTAAGTCTGTTGATGAATTGCGAGTTGAAGTTGTTAATGAGACGGGTGGTGGAAATGAGGATACTGGTGTTGATAAAACATTAAAGTCAGTAGTAGTTGATGGTGCTGTGAGTGCGAGCAAGGATGTTTCTGTGGGTGAGTCTGATGAGACAGTGATAGAAGTGGAAAGAAATGCTGCTGATGTAAAATCTTCTAGTAGTAAGAATAATGAGTCGTCGGTGGTTGAAAATCAGCACATTGAAAACGAGGAGGAAGATGATCTTGGGTGGGATGATATTGAGGATCTTAGCAGTATCGATGACAATAAAGCAACTCAATCTCAGAGTCAGAGTGGTAGCATCAGCAAGGATGATTTGCGGAAGCGCCTTAGCACTGCAGAGGAAGATGAAGACTTGAGTTGGGACATTGAAGATGATGATGATGAGCCTGTGAAGGCTTGA 1377 0.4292 MNFFKSVFSDDPDPLQPESQPESNNADPIPDSAGADDTWNFGGLIKTLTAKSESIIETYRRDLQEFSTGLKNEIEVAQDSVGEIGSTVIKGTAQIISQGKEAILAVNLDSDNATATTTATANRDSNSLDSKRYSRFDAQISAIQSDVGTYTEVPEDLGEFNEWKLGFVLDGKSDEMESLFRENDVMESVYKRIVPNSIDHETFWYRYYYKVYRLKKAEDVRAKLVRRISKDEEDLSWDVEDEDDDDDSVAEKEKKHEGENLGKSVDTDLNIGASSSGSSDEKRLSVEEVKHSESKEEERDDSMQTNELGNEMGKSVDELRVEVVNETGGGNEDTGVDKTLKSVVVDGAVSASKDVSVGESDETVIEVERNAADVKSSSSKNNESSVVENQHIENEEEDDLGWDDIEDLSSIDDNKATQSQSQSGSISKDDLRKRLSTAEEDEDLSWDIEDDDDEPVKA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1224 458 MobiDBLite consensus disorder prediction 392 407 - -
Tpr1g1224 458 Coils Coil 214 234 - -
Tpr1g1224 458 SMART wurzfinal6 163 215 IPR005607 -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 427 441 - -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 348 458 - -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 372 388 - -
Tpr1g1224 458 ProSiteProfiles BSD domain profile. 163 215 IPR005607 -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 1 36 - -
Tpr1g1224 458 PANTHER SYNAPSE-ASSOCIATED PROTEIN 79 452 - -
Tpr1g1224 458 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 77 - -
Tpr1g1224 458 Gene3D BSD domain 124 227 IPR035925 -
Tpr1g1224 458 Pfam BSD domain 163 219 IPR005607 -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 238 317 - -
Tpr1g1224 458 PANTHER PROTEIN, PUTATIVE-RELATED 1 77 - -
Tpr1g1224 458 PANTHER PROTEIN, PUTATIVE-RELATED 79 452 - -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 281 305 - -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 249 263 - -
Tpr1g1224 458 MobiDBLite consensus disorder prediction 412 426 - -
Tpr1g1224 458 SUPERFAMILY BSD domain-like 133 220 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1224 Tpr-Chr1 10947956 10949625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1224 - - gmx:100792113 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1224 1 10947956 10949625 Tpr1g1224 1 10947956 10949625 ECH
Tpr6g3604 6 39116081 39117741 Tpr1g1224 1 10947956 10949625 PCT