Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3452 ATGGGGTCGTCAGTAGATGATGATAGTGGATCTGCAGAGGTTGAGGTTGAGGCGATCATCAATAAATACCACAAATTCGAGGCTGTGCCGAACACGTGCAGTTCGATTATAAGACAGCGAATCGAGGCTCCGGCGCAAAGGGTGTGGGGGTTCATTCGCAGCTTCGAGAGCCCTCAGAAGTACAAGCACTTCATAAAGAGTTGCAAGATGAAGGGAGATGGAGGCGTGGGTAGCATCAGAGAGGTGACCGTGGTTTCTGGTCTCCCTGCATCCACCAGCACCGAGAGGCTCGAGATCTTAGACGATGACAACCACATACTCAGCTTTAGGGTTCTCGGTGGTCACCACCGACTCAAGGATTATCGCTCTGTCACCTCTGTCAATGAATTTCGAATGCAAGATGGTCACGTCTATACTCTTGTTCTCGAGTCTTACATCGTCCACATACCACATGGCAATACTGCTGAGGATACTAAGATGTTTGTCGATACTGTCCTGATGGACACTGATCAGTGA 516 0.4942 MGSSVDDDSGSAEVEVEAIINKYHKFEAVPNTCSSIIRQRIEAPAQRVWGFIRSFESPQKYKHFIKSCKMKGDGGVGSIREVTVVSGLPASTSTERLEILDDDNHILSFRVLGGHHRLKDYRSVTSVNEFRMQDGHVYTLVLESYIVHIPHGNTAEDTKMFVDTVLMDTDQ 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3452 171 Pfam Polyketide cyclase / dehydrase and lipid transport 39 128 IPR019587 -
Sto9g3452 171 PANTHER - 11 166 - -
Sto9g3452 171 SUPERFAMILY Bet v1-like 33 166 - -
Sto9g3452 171 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 11 166 - -
Sto9g3452 171 CDD PYR_PYL_RCAR_like 33 166 - -
Sto9g3452 171 Gene3D - 8 168 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3452 Sto-Chr9 33940868 33941670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3452 K14496 - rcu:8275610 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1040 5 6993047 6993607 Sto9g3452 9 33940868 33941670 CCT
Sto9g3452 9 33940868 33941670 Sto9g3452 9 33940868 33941670 ECH