Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1040 atggcgtcatcagaagcacggcctcagggTCTAAGCCCAGAGGAATTCAGAGAATTGGAGCCCATCATTGAGAAATACCACAAATTCGAGGCGTGTCCCAACACGTGCACTTCCATCATTACCCAACGGATCGATGGGCCGGCGCGGAGAGTGTGGCCTTTGGTGCGAAGCTTCGAGAACCCTCAGAAGTACAAGCACTTCATCAAGGGCTGCAATATGAGGGGCGACGGCGGCGTGGGCAGCATCCGAGAGGTCACGGTGGTGTCGGGGCTGCCGGCGTCCACCAGCACGGAGAGGCTGGAGATTTTGGACGACCACAAGCACATACTCAGCTTTAGGGTTGTGGGCGGAGAGCATCGCCTCAAGAATTATCGATCCGTGACGTCGGTGAATGAGTTCAAGAAGGAGGAGGATGGGAAGGTATATACCATTGTGTTGGAGTCCTATATCGTAGATATACCCGAAGGGAATACGGGAGAGGATACTAAGATGTTTGTCGATACTGTGGTTAAGCTTAACCTTCAGAAGCTTGGGGTCGTCGCTATGGCTACACCCATTTGA 561 0.5009 MASSEARPQGLSPEEFRELEPIIEKYHKFEACPNTCTSIITQRIDGPARRVWPLVRSFENPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDHKHILSFRVVGGEHRLKNYRSVTSVNEFKKEEDGKVYTIVLESYIVDIPEGNTGEDTKMFVDTVVKLNLQKLGVVAMATPI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1040 186 Gene3D - 2 185 IPR023393 -
Sto5g1040 186 CDD PYR_PYL_RCAR_like 36 177 - -
Sto5g1040 186 Pfam Polyketide cyclase / dehydrase and lipid transport 41 177 IPR019587 -
Sto5g1040 186 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 13 184 - -
Sto5g1040 186 SUPERFAMILY Bet v1-like 36 178 - -
Sto5g1040 186 PANTHER - 13 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1040 Sto-Chr5 6993047 6993607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1040 K14496 - pvy:116143964 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1040 5 6993047 6993607 Sto9g3452 9 33940868 33941670 CCT
Sto5g1040 5 6993047 6993607 Sto5g1040 5 6993047 6993607 ECH