Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3421 ATGCTCCTACCCACTACTGCATCCAGGTCCTTCTTCAGAGTCTTCTCTGAGCTGAGATTCCACCATAAGCTGAGGGAAGGCAACCGGTGTGCTGATGCTCTAGCAAGATATGCTATCAATTCTAGGTGTGGACTGACGGTTTTTGAGAAGATCAGAATGAATGGAGGCGggaaaattcaagaaaaggAAGGCGACGATGATGGAATAATTAGGATGTGGGAGCAAGAATTGGGGCTTGTGgatgaactagaaagagagGAAGGCATCAATATTGAAGAAGAGCAAGTAGAAAGCAATGCGGATGCGGAGGAGTTGTTGTCGAAGCAAGATTCTGAGTGGTGGGATGATCCTAATTTTCCGGAAGCAGAGTTCAAGAAAGCCTTCAGAATGGGAAAGGCTACCTTCAACATGATTTGCGAGCACATCAAACCCCACTCCGCTAGAAAGATTTCTGTAAGGCAAAGAGTGGCCGCATGCTTATGGAGATTAGCCACCGGCGATGCTTTTAAAGACGTTGCCCGGAAATTCGGGATGACGAAAACAACTTGCCAGAATTTAATTCTGGAGGTTTCTAATGACATCATCTATGTGCTCGCGCCCAGGTATCTGCAATGGCCCGATGCTCAAGCAATCGCCATCTACCAATCACAATTTCAATCAATTTCAGGGCTACAAGGCGTGATAGGCTCTATTCGCACCTCCCATATCTCAATTGTCACTCCCAACTCTCTTACTTGTAATAATGTGAGTGATTATCTCAATAAGAAGCTAACACACAGGAATCGCAAGCCTTCCTACTCGGTAATAGTTCAAGGTATTGTTGATCCAATAGGGGCCTTCCTTCATGTTTCACATGCTTCGCCTGGTTCCATGTCTGATGAAATGGTGTTCCGTGTATCTGACTCCCCTGTTTCAACGGGAGCTCTATCTCTCGATCTTAACAACTGCCTTGTGGGGACTTCAGGCTACTCTCTCATAGATTTTGTTCTGGTGCCTCTTACTCGCCACAATCTTACTCAACAAGAGCTTGCTTTTAACGACGCCGTTCAAAAGATTCAAAAGATTTCAAAAGATGCATTTGCCAGATTGAAAGGAAGGTGGCGTTTCTTGAACAAGCTTGTCAAATCCTCACAATTGCTCACCTACATTGACGCATCCTGCGTTCTGCACAATATATGTGAACTTGAAAATGAAGAAATGGATCCTGATCTCCTCGTCATTGATGTTGAAGATGATGACATCACAACGCAGCAACCAGGCTACCCATAG 1269 0.4389 MLLPTTASRSFFRVFSELRFHHKLREGNRCADALARYAINSRCGLTVFEKIRMNGGGKIQEKEGDDDGIIRMWEQELGLVDELEREEGINIEEEQVESNADAEELLSKQDSEWWDDPNFPEAEFKKAFRMGKATFNMICEHIKPHSARKISVRQRVAACLWRLATGDAFKDVARKFGMTKTTCQNLILEVSNDIIYVLAPRYLQWPDAQAIAIYQSQFQSISGLQGVIGSIRTSHISIVTPNSLTCNNVSDYLNKKLTHRNRKPSYSVIVQGIVDPIGAFLHVSHASPGSMSDEMVFRVSDSPVSTGALSLDLNNCLVGTSGYSLIDFVLVPLTRHNLTQQELAFNDAVQKIQKISKDAFARLKGRWRFLNKLVKSSQLLTYIDASCVLHNICELENEEMDPDLLVIDVEDDDITTQQPGYP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3421 422 PANTHER NUCLEASE 109 416 - -
Sto9g3421 422 Pfam DDE superfamily endonuclease 245 391 IPR027806 -
Sto9g3421 422 PANTHER UNCHARACTERIZED 109 416 IPR045249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3421 Sto-Chr9 33807572 33809552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3421 - - pop:18107592 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3421 9 33807572 33809552 Sto9g3421 9 33807572 33809552 ECH
Sto5g1007 5 6782635 6784209 Sto9g3421 9 33807572 33809552 ECH