Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1007 ATGAAACTCCCGGCTTTCGCGGACCCAGAATCCGTCTCTCACATTTTCAGCTTGCTCCGGAGCTCGTTCGATCAAATGAACGAGCCCACCAATAACAGCAGCAGCGCCAGAAAACGACgcagaaaaaatgaaaaggcTGGGGGAGATGTGCTGGACGAGCAAGAGAAGCATGACCAGGAGGAGCTCGACAGAGTCTCCGAGGAGGAGAAGCTGTCCTTGGAGGCGAACCACAAGAAGACAACGAAGACCATGCTGGAATACTACTCCAATCTTGAGGATTATTACAACGAAGTCGAAGAATCGGAGCGAATTAGGAGAAAGAAATCGCGGGCCATGGCCGGAGAAAAGGTTCAAATGGATAAAGTGCTGAAATCGGGAGCAGGTGGTGGGCCCCAAAGCCACCAGCGACGGCTGTGGGTGAAGGACCGTTCGGGAGCATGGTGGGACGAATGTAACACGCCCGATTTTCCAGAAGAAGAGTTCAAGAAAGCATTTAGAATGGGAAGGGCAACGTTTGATTTCATTTGTGAGGAGCTTAATTCGGTTATTGCAAAAGAAGATACAACTTTGAGAAACGCTATTCCTGTGAGGCAAAGAGTGGCTGTTTGTTTATGGAGATTGGCCACCGGTGATCCTCTTCGACTTGTATCCAAACGCTTCGGATTGGGCATATCAACTTGCCACAAGCTGGTTCTTGAGGTATGCACTGCCATAAAGACTGTGTTGATGCCTAAGTATTTACAATGGCCTGATGAGGCAACATTGAGGAATATCAAAGGTGAATTTGAATCAATTTCAGGGATTCCCAATGTGGTGGGGTCTATGTACACCTCGCATATCCCCATTATAGCTCCCAAGATTAGTGTGGCTGCTTATTTCAATAAGAGGCATACAGAAAGGAATCAGAAGACTTCGTATTCCATTACAGTTCAGGGTGTGGTTGACCCAAGAGGGGTGTTCACAGATGTGTGCATTGGGTGGCCTGGTTCAATGCCTGATGATCAGGTGTTAGAGAAGTCTGCACTTTTCAAAAGGGCTGATAAGGGGCTTTTGAAAGGTATGTGGATTGTTGGGAGTTCAGGGTACCCTTTGATGGATTGGGTTTTGGTGCCTTATACTCAGCAGAATCTTACTTGGACACAGCACGCGTTTAACGAGAAGATTGGAGAGGTTCAGAAGGCTGCAAAAGATGCATTTGCGAGATTGAAAGGAAGGTGGTGTTGCTTGCAGAAGAGGACAGAGGTGAAACTACAAGATTTGCCTGTTGTTCTTGGGGCATGCTGTGTGTTGCACAATATATGTGAAATGAGGAATGAAGAAATAGATCCTGAGCTGAAGTTTGAGCTAGTGGATGATGAGATGGTGCCAGAGGTTGCTTTGAGATCAGCGAGCTCCATGAAAGCTAGGGATGCAATTGCTCATAATCTTTTACACCATGGCCTCGCAGGCACTTCTTTTCTTTAG 1464 0.4645 MKLPAFADPESVSHIFSLLRSSFDQMNEPTNNSSSARKRRRKNEKAGGDVLDEQEKHDQEELDRVSEEEKLSLEANHKKTTKTMLEYYSNLEDYYNEVEESERIRRKKSRAMAGEKVQMDKVLKSGAGGGPQSHQRRLWVKDRSGAWWDECNTPDFPEEEFKKAFRMGRATFDFICEELNSVIAKEDTTLRNAIPVRQRVAVCLWRLATGDPLRLVSKRFGLGISTCHKLVLEVCTAIKTVLMPKYLQWPDEATLRNIKGEFESISGIPNVVGSMYTSHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPRGVFTDVCIGWPGSMPDDQVLEKSALFKRADKGLLKGMWIVGSSGYPLMDWVLVPYTQQNLTWTQHAFNEKIGEVQKAAKDAFARLKGRWCCLQKRTEVKLQDLPVVLGACCVLHNICEMRNEEIDPELKFELVDDEMVPEVALRSASSMKARDAIAHNLLHHGLAGTSFL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1007 487 Pfam DDE superfamily endonuclease 276 432 IPR027806 -
Sto5g1007 487 PANTHER NUCLEASE 50 486 - -
Sto5g1007 487 PANTHER UNCHARACTERIZED 50 486 IPR045249 -
Sto5g1007 487 MobiDBLite consensus disorder prediction 34 69 - -
Sto5g1007 487 MobiDBLite consensus disorder prediction 20 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1007 Sto-Chr5 6782635 6784209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1007 - - gmx:100804219 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1007 5 6782635 6784209 Sto5g1007 5 6782635 6784209 ECH
Sto5g1007 5 6782635 6784209 Sto9g3421 9 33807572 33809552 ECH