Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3363 ATGAAGTTTATGAAGTTAGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAAATCTATAAGGTATGTATCGTCCAAATTGGCTACAGATGTGGTCATAAATGTTGGCGAAGTGAAGTTTTACCTTCACAAGTTCCCACTACTGTCCAAGAGCAATCAATTGCAGAAGTTGGTATCAAAGGCTAATGAAGAGGATTCTGATGAAGTTTTCTTGGCTGATTTCCCTAGAGGACCCAAGGCATTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTCAATCCTTACAATGTTGTGGCTGCTCGGTGTGCAGCTGAGTACCTCGAGATGACTGAGACTACTAAATCTCTTTTGCCATGGTCTGAGGATTTGAAGATCATTGGCAGATGTGTAGATTCCATAGCTTCTATAACATCTGTGGACCCAGCAAATATTACATGGTCCTATACTTATAACAGGAAATTAACGGAGCCTGATAAAATTACTGAGCACGAGACGACATTTCAGGAGAAACTTGAGTCTGTTCCTAAGGATTGGTGGGTAGAAGATATATGTGAGCTAGACGTCGATCTTTACAAGCGAGTAATGATTGTTGTGAAATCAAAGGGAAGAATGGACAGTGTTGTGATTGGAGAGGCACTAAAAATATATGCAGTTAGGTGGTTGTCTGATTCTATTGCTGCATTTTCTGAAGCTCATGCATGGAGGAACAAATCTCTTGTAGAAACAATTGTCTGTCTATTGCCATCTGACAACGGTATGGGTTGTTCATGTAGTTTCTTGCTGAAACTACTGAAAGTGGCCATATTAGTTGGAGCAGACGAGTCATTGCAAGAAGAATTGATAAAGAGCATCTGCCTAAAATTGCATGAAGCTTCTGTCAACGATTTATTGATCCCTGCAAGGTCTCCTCAGAATACCAAATATGATGTCCAATTGGTACAATGTCTTTTGAATCTATACATTAATGATAAGGGCGACTGCAATATGGAAACTTCTGAAAAGAACGATAAAGCTTTATTTGGGAATAGGTTATTTGTGAATATTGGCAAGTTGGTGGATGGTTATCTTGCAGAAATTGCACATGATCCGAATCTTAGTCTCTCTAGTTTTGTTGACTTGTCACAATCAGTTCCAGGGTTTGCTAGACCAAATCATGATGGCCTTTACAGAGCTATTGACATTTACTTGAAGGAGCACCCAAATATGAAAAAAGCTAAAAGGAAGAAGATATGTGGACTAGTGGATGTGAAGAAACTGACCGTGGAAGCATCTATGCATGCTGCACAGAATGAGCGTCTTCCTCTTCGGGTCGTAGTACAGGTTCTCTTTGTTGAGCAGGTTAGAGCTTCTGCCACCGCACAAGCTCTTGGTAATAAGAATTCATGCAAGCCTTCGCACTCAGTTATGAGTGCAAATGAAGAATGTGAGAAAGCAGTAGGAGAGAAGTGCCAATCCCTCAAGGATCAGATCAGTCATCTGAAGATTAAAGATGAAGAGTTGTGCAAGAATGAGAAACTGAGCAAGAAGAACAGCAAAAACATCATAAGTGGGATGAAATTGCTGCCTTCACGATCAAGGAGAATCTTTGACAAGTTATGGAATGTGGGTAAAGGACATGGAGAGAACAGGAGCTCTGAGACTTCAGGGAGTTCCAATAGCCGGACTTCTATTGTAGCAGGAGATACCAAGTCTTCTGGTTCATCTTCTAGACACAGGAGGCATTCTATCTCTTAG 1743 0.4079 MKFMKLGSKPDALQADGKSIRYVSSKLATDVVINVGEVKFYLHKFPLLSKSNQLQKLVSKANEEDSDEVFLADFPRGPKAFEICAKFCYGMTVTLNPYNVVAARCAAEYLEMTETTKSLLPWSEDLKIIGRCVDSIASITSVDPANITWSYTYNRKLTEPDKITEHETTFQEKLESVPKDWWVEDICELDVDLYKRVMIVVKSKGRMDSVVIGEALKIYAVRWLSDSIAAFSEAHAWRNKSLVETIVCLLPSDNGMGCSCSFLLKLLKVAILVGADESLQEELIKSICLKLHEASVNDLLIPARSPQNTKYDVQLVQCLLNLYINDKGDCNMETSEKNDKALFGNRLFVNIGKLVDGYLAEIAHDPNLSLSSFVDLSQSVPGFARPNHDGLYRAIDIYLKEHPNMKKAKRKKICGLVDVKKLTVEASMHAAQNERLPLRVVVQVLFVEQVRASATAQALGNKNSCKPSHSVMSANEECEKAVGEKCQSLKDQISHLKIKDEELCKNEKLSKKNSKNIISGMKLLPSRSRRIFDKLWNVGKGHGENRSSETSGSSNSRTSIVAGDTKSSGSSSRHRRHSIS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3363 580 SMART BTB_4 29 127 IPR000210 GO:0005515
Sto9g3363 580 MobiDBLite consensus disorder prediction 543 568 - -
Sto9g3363 580 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Sto9g3363 580 SUPERFAMILY POZ domain 22 115 IPR011333 -
Sto9g3363 580 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 114 IPR029961 GO:0060918|GO:0099402
Sto9g3363 580 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 114 567 IPR029961 GO:0060918|GO:0099402
Sto9g3363 580 ProSiteProfiles NPH3 domain profile. 180 451 IPR027356 -
Sto9g3363 580 MobiDBLite consensus disorder prediction 538 580 - -
Sto9g3363 580 Pfam BTB/POZ domain 26 117 IPR000210 GO:0005515
Sto9g3363 580 Pfam NPH3 family 180 427 IPR027356 -
Sto9g3363 580 Gene3D Potassium Channel Kv1.1; Chain A 8 120 IPR011333 -
Sto9g3363 580 PANTHER OS12G0117600 PROTEIN 4 114 IPR043454 -
Sto9g3363 580 PANTHER OS12G0117600 PROTEIN 114 567 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3363 Sto-Chr9 33465431 33468895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3363 22 471 EF-hand Containing Proteins AT3G44820 31.068 4.07e-74 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3363 - - gmx:100809437 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0920 5 6219150 6222543 Sto9g3363 9 33465431 33468895 CCT
Sto9g3363 9 33465431 33468895 Sto9g3363 9 33465431 33468895 ECH