Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0920 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAAATCGATCAGGTATGTCTCAGCTGATTTGGCCACTGATGTCATCATTAATATTGGTGATGTGAAGTTTTACCTTCACAAGTTTCCCCTACTGTCTAAGAGTAATCAACTGCAAAAGCTGGTATCAAAGGCTAATGAAGAGAATTGTGATGAAATACACATGGATGATTTCCCTGGAGGGCCTAAAGCCTTTGAGATATGTGCAAAATTCTGCTATGGAATAATTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTCGTTGTGCAGCTGAGTACCTAGAGATGAATGAGGATATTGACAgaggaaacttgatttttaaaatCGAGGTGTTTCTAAACACAAGTATTTTTCGTGGCTGGAAGGATTCCATAATTGCCCTCCAAACTACTAAATCTCTTCTTCCGTGGTCAGAGGATCTGAAGATTGTTGGAAGATGCATTGATTCCATTGCTTCTAAGACTTCTGTGAACCCAGCACAAATCATGTGGTCTTACACATATAACAGGAAACTAACAGAGCTTGATGATAAAATTACCTCGGCTCAAGAGAAAACCGAGCCGGTTCCTAAGGACTGGTGGGTTGAAGATGTATGCGAGCTAGACATTGATCTTTATAAACGAGTCATGATTTCTGTGAAATCAAAGGGAAGAATGGATGGTGTTGTAATTGGAGAGGCACTAAAAATCTATGCACTCAGATGGTTGCCTGATTCTGTTGATGCATTGGTGTCTGATTCGCATGCACGTAGGAACAAATCTCTGGTTGAGACAATTGTGTGTTTATTGCCATCTGAGAATAGTGTGGGATGTTCATGTAGCTTCTTGCTGAAGCTATTGAAAGTGGCGATATTAGTTGGAGCAGATGAGTCATCTAGAGAAGAATTAATGAAGAGCATTAGCCTCAGATTGCATGAAGCTTCTGTGAAAGACTTGTTGATTCCTGCGAGGTCTCCCCAAACAACCATATATGATGTCCCATTGATACAATATCTTGTGAGTCGATACATCGAAAAGGGAGGTTTTGATAGGGAAGTTGTGGAGAATGATGATAAAAGAAAAAGCTCCTTATTGAATAATGTGGGTAGGGTGGTGGATGGTTATCTCGCAGAAATTGCACATGATTCAAATCTCAGCCTCTCTAGTTTTGTTGACTTGTCTAAGTCAATTCCAGAGTTTGCTAGACCAATTCACGATGGTCTCTACAGAGCTATTGATGTCTACTTGAAGGAGCACCCCAATTTAACAAAAGCAGAAAGGAAGATGATAACTAGTCTGATGGATGTGAAGAGATTGACAGTGGATGCATCCATGCATGCAGCACAGAATGATCGGCTTCCACTTCGAGTTGTGGTGCAAGTTCTGTTCTATGAGCAGGTTAGAGCTTCGGCCAATGCTCGAGCTCTTGGTAACAACAATCAGCACGATCCTGCGCGGTCGGATGAGGATTTTGAAAACAAAATGAGTCATTTGAGTATCAAAGATGAAGAGTTCCCGAAGAATGGGAAAATGAGCAAGAAGAATAGCAAAAACAGTAAAAGTGGGATGCAATTGTTGCCATCTCGTTCAAGGAGAATCTTTGATAAGTTATGGATTGTGGGGAAAGGACAAGGAGAGAATAGGAGCTCCGAGACTTCAGGGAGTTCTATTAGTCCAACTTCTGTTGTCCCTATAGATACCAAATCATCTGGTTCTTCCTCCAGACAAAGGAGGCATTCTATCTCTTAG 1776 0.4082 MKFMKLGSKPDALQADGKSIRYVSADLATDVIINIGDVKFYLHKFPLLSKSNQLQKLVSKANEENCDEIHMDDFPGGPKAFEICAKFCYGIIVTLNAYNVVAARCAAEYLEMNEDIDRGNLIFKIEVFLNTSIFRGWKDSIIALQTTKSLLPWSEDLKIVGRCIDSIASKTSVNPAQIMWSYTYNRKLTELDDKITSAQEKTEPVPKDWWVEDVCELDIDLYKRVMISVKSKGRMDGVVIGEALKIYALRWLPDSVDALVSDSHARRNKSLVETIVCLLPSENSVGCSCSFLLKLLKVAILVGADESSREELMKSISLRLHEASVKDLLIPARSPQTTIYDVPLIQYLVSRYIEKGGFDREVVENDDKRKSSLLNNVGRVVDGYLAEIAHDSNLSLSSFVDLSKSIPEFARPIHDGLYRAIDVYLKEHPNLTKAERKMITSLMDVKRLTVDASMHAAQNDRLPLRVVVQVLFYEQVRASANARALGNNNQHDPARSDEDFENKMSHLSIKDEEFPKNGKMSKKNSKNSKSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSISPTSVVPIDTKSSGSSSRQRRHSIS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0920 591 MobiDBLite consensus disorder prediction 552 591 - -
Sto5g0920 591 ProSiteProfiles NPH3 domain profile. 208 477 IPR027356 -
Sto5g0920 591 Gene3D Potassium Channel Kv1.1; Chain A 11 118 IPR011333 -
Sto5g0920 591 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 577 IPR029961 GO:0060918|GO:0099402
Sto5g0920 591 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Sto5g0920 591 MobiDBLite consensus disorder prediction 554 591 - -
Sto5g0920 591 MobiDBLite consensus disorder prediction 506 520 - -
Sto5g0920 591 MobiDBLite consensus disorder prediction 506 535 - -
Sto5g0920 591 Pfam BTB/POZ domain 28 116 IPR000210 GO:0005515
Sto5g0920 591 PANTHER OS12G0117600 PROTEIN 4 577 IPR043454 -
Sto5g0920 591 SUPERFAMILY POZ domain 23 114 IPR011333 -
Sto5g0920 591 Pfam NPH3 family 208 453 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0920 Sto-Chr5 6219150 6222543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0920 22 476 EF-hand Containing Proteins AT3G44820 33.333 5.18e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0920 - - gmx:100809437 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0920 5 6219150 6222543 Sto9g3363 9 33465431 33468895 CCT
Sto5g0920 5 6219150 6222543 Sto5g0920 5 6219150 6222543 ECH