Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3318 ATGGCTTCCAACAAGCTCCGTGCCACCATTCTGGTGCTCTCCCTCCTCCTAGTCGTCTTTTCATCCTTCACCGACGCTTGCGGCCCATGCAAGCCCAAGCctaagcccaagcccaagcccaagcctTGTCCCACCCCTCAGTCCTACTGCCCTCTGGACACCTTGAAGCTGAAGGTTTGCGCTGACGTCCTTGGGCTTGTGAACATCGTGGTTGGGTCATCCCCTACCACTCAGTGCTGCTCATTGATTCAAGGTTTGGCTGATTTAGACGCTGCGCTTTGCCTTTGCACTGCGATTAAGGCCAACGTGCTTGGGATCAACTTAAACGTTCCTCTCTCACTTAGCCTGCTCCTTAATGCTTGTCAAAAAACTCTTCCTGCTGCTTTCTTGAACTGTGTCGTCCGCACACGCCAGGGAACACAATTCAAGAAAGCTGTGGAAAATCACTGA 450 0.4911 MASNKLRATILVLSLLLVVFSSFTDACGPCKPKPKPKPKPKPCPTPQSYCPLDTLKLKVCADVLGLVNIVVGSSPTTQCCSLIQGLADLDAALCLCTAIKANVLGINLNVPLSLSLLLNACQKTLPAAFLNCVVRTRQGTQFKKAVENH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3318 149 PANTHER - 1 129 - -
Sto9g3318 149 Gene3D - 47 133 IPR036312 -
Sto9g3318 149 SMART aai_6 50 132 IPR016140 -
Sto9g3318 149 PANTHER PROLINE-RICH PROTEIN DC2.15 1 129 - -
Sto9g3318 149 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 129 IPR036312 -
Sto9g3318 149 Pfam Hydrophobic seed protein 50 129 IPR027923 -
Sto9g3318 149 CDD HPS_like 50 129 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3318 Sto-Chr9 33157376 33159775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3318 44 129 Acyl Lipid Metabolism Gene Families AT4G22490 33.708 1.02e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3318 - - tcc:18587771 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0874 5 5833435 5833821 Sto9g3318 9 33157376 33159775 CCT
Sto9g3318 9 33157376 33159775 Sto9g3318 9 33157376 33159775 ECH