Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3309 ATGATGGATCCGAGTAACATTTCACCTGCTGATGGGCTTGAAGCAGTTCACCAAAATGGTGTTCCTGATGAACCTTCTAACTCCGGAAAGGATAGCATTGTTTCAAATGATGTAGACCCCAGCATTGCTGAAATTACAGAAACTGTAACTTCAAACGGAAATATTGAAAATGATGTTCTTTTGGATGACACTGCAACTATAAACTTATCTGTGGCAGAAATTAAAGAGGAATCTAATGATAGTGCTGTTTGTAACAGTGTGACCATTTCTAAGGCAAAGGACGTGAAAATCACAGTTCAATCAGAGCAAGTAAGAGCATCAAAAGGTCCTGTCAAGAACAAGAATGGGAAGTCCCCTAGTCTTAAAGGTGCTCATGCAAGTGGGGTGAAGAAAAGCAAGGATGGAAAGGATGAAGAAGCACAATCTTCTGCTCCAAATGGTTCTTTGGCTTTAAACACTCGACAGCCTATTAAAAGCAGATCATTCAATGACAGGAAGACTCAGATTTCCAAGcaCTCTGATAAGTCTGATGCAGCAGCTTCTGGAGCACCCACGGAGAATACAAAACCAAaatcattgaagaaagaaaCTCATGATAAAGTTCAGGGAGAAGCACAATCTTCTTCTGTCACTACCGGTGATGGCAAACCTCGCAAGGTGGGGACACTTCCAAATTATGGATTTAGTTTCAAGTGTGATGAACGAgctgaaagaagaaaagagTTCTATACTAAGCTTGAAGAAAAAATTCATGCAAAGGAAGTGGAGAAGAGTAACATTCAAGCCAAAACCAAGGAGACCCAAGAAGCTGAGATAAAGATGCTCAGGAAGACTCTAGCTTTTAAAGCAACTCCAATGCCGAGCTTCTACCAGGAGCCTTCTCCTCCAAAGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGAAGGAAGAATTCGACTGACTCAGAGTCGGATGGAAACCCTAGCAGCAGTGCTCACCAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCTCAGATTAACCTCACTAAGGGGGTCACTCATGTCCACCAAAAGAAACCTCAACGGAGATCTCTTCCTTCTCGACTGCCTTCTGAAAGAACTGGTTCATCCCATTCAACAACTACAGTCACTTCATCTAAGGCACAGAATGATGGAAAGACTGCTTTGTCGGGTGTAACAAATGAAGATACCCCCTTGTCCAATGTGAGAGGGAAACAGAAATCCCAAATGGATGCAGattatgaagaaaatgggaCCTCTTCTTACAGTGCAAGTGAAGCTCCATTTCTCATTGAAGAGCAAAATGCCACCATAGATAAGCCGATTGAAACAGAACCTCATGTGAATGGTGACGTAGTGGTTGAAGAGCAACCTCAGATTCCCTTGGTACAGGAACCTATAGCGGCAGAGCATTAA 1437 0.4134 MMDPSNISPADGLEAVHQNGVPDEPSNSGKDSIVSNDVDPSIAEITETVTSNGNIENDVLLDDTATINLSVAEIKEESNDSAVCNSVTISKAKDVKITVQSEQVRASKGPVKNKNGKSPSLKGAHASGVKKSKDGKDEEAQSSAPNGSLALNTRQPIKSRSFNDRKTQISKHSDKSDAAASGAPTENTKPKSLKKETHDKVQGEAQSSSVTTGDGKPRKVGTLPNYGFSFKCDERAERRKEFYTKLEEKIHAKEVEKSNIQAKTKETQEAEIKMLRKTLAFKATPMPSFYQEPSPPKVELKKIPTTRAKSPKLGRRKNSTDSESDGNPSSSAHQGRLSLDEKVSQINLTKGVTHVHQKKPQRRSLPSRLPSERTGSSHSTTTVTSSKAQNDGKTALSGVTNEDTPLSNVRGKQKSQMDADYEENGTSSYSASEAPFLIEEQNATIDKPIETEPHVNGDVVVEEQPQIPLVQEPIAAEH 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3309 478 MobiDBLite consensus disorder prediction 1 40 - -
Sto9g3309 478 PANTHER PROTEIN WVD2-LIKE 4 2 468 IPR044833 GO:0008017
Sto9g3309 478 MobiDBLite consensus disorder prediction 159 173 - -
Sto9g3309 478 MobiDBLite consensus disorder prediction 367 434 - -
Sto9g3309 478 MobiDBLite consensus disorder prediction 21 40 - -
Sto9g3309 478 Pfam Targeting protein for Xklp2 (TPX2) domain 228 299 IPR027329 -
Sto9g3309 478 MobiDBLite consensus disorder prediction 323 354 - -
Sto9g3309 478 Coils Coil 243 263 - -
Sto9g3309 478 MobiDBLite consensus disorder prediction 141 158 - -
Sto9g3309 478 MobiDBLite consensus disorder prediction 283 434 - -
Sto9g3309 478 MobiDBLite consensus disorder prediction 101 228 - -
Sto9g3309 478 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3309 Sto-Chr9 33110201 33113763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3309 - - gsj:114408962 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0856 5 5731488 5734793 Sto9g3309 9 33110201 33113763 CCT
Sto9g3309 9 33110201 33113763 Sto9g3309 9 33110201 33113763 ECH