Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0856 ATGATGGATCCAAGTAATCATTCACTTGCTGATGGGCTTGAAGCGATCCACCAAAATGGTATTCACGAAGAAGCTTTTAACTCTGGAAAGGGTGGTGTTGTCTCAAATGATATAAACCCCAATGTTGCCGAAATTACAGATGCTCTTGCTTTAAATGGAGATTTTGAAAATGTTGTGAAGTTGGATGATACTGCTACTAATGACTCATGTATGGGAGAAATCAAAGAGGGATCAATTGATAATGTGAAGAGCATCAATGTGACCATTTCTAAGgaAGAGGAGGTGAAAATCACAATTCAAACAAAACAATCAAGAGCATCAAAGGGTCCTATCAAGAATAAGAATGTGAAGCCCCCAAGTCCTAAAGTCATTTATGCTAGTGGGCCAAAAAAGAACAAAGATGGAAAAGATGAAGAGGCGCCATCTGGTGCTCCAAATGGTTCTCTAGCATTAAACAATCGCTCGAGACAACCTATTAAAAGTAGATCATTCAATGAGAAGCAAACTCAAGTGTCCAATGAGTCTGGAAAGTCTGATGCAGCACCTGCTGAAGCACCCATGGACAAGAAAATACCAAAGCTATCGAGGAAAGAACCCGTTGATGAAGTTCAAGGAGAAGAAGAATCTTCTTTTACCATTGCAGAAGATACCAAACCCCGTAGAGCGGGAGCACTTCCTAATTATGGATTTAGTTTCAAGTGTGATGAACGAGCTGAGAAAAGAAAGGAGTTCTACACTAAGCTTGAGGAAAAAATTCATGCGAAGGAAGTGGAGAAGAGTAACCTACAAGCAAAGACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGGAAGAGTCTAAATTTTAAAGCAACTCCAATGCCCAGTTTCTACCAGGAGCCTCCACCTCCCAAGGTGGAGTTAAAGAAGATACCTACTACAAGAGCAAAATCTCCTAAGCTTGGTCGAAAGAAGAGTTCAAGCAATTCGGAAGCAGAGGGAAACACTGGAAGCAGCAGTCGACAAGGACGTTTGAGTCTAGATGAGAAAGCATCTCAGAGTAACTTCGCTAAAGTTGCCTCACCTGTCCATCAAAAGAAGCCACAGCGGAAATCTCTTCCTCCTCGACTGCAATCTGAAAGGACTAGTTCATCCAATTCAAAAATTGCAGGCACTTCAGCCAAGCCCAAGGCAATAAATGAGAGAAAGACCATACCCAGTGTGCCGAACAAAGATAGCACCATGTCCAATGCAACCGGTGAAGAGAACAGTACCGTGTTCAGTGAGACAGGTGAAGCTGCACCTCACATGGAAGAGCTGAATGCACTTCTATCAGATATGCCTAGTGAAGTAGTGCCTCCGGTGAATGGCGACACAGTGGTTGAAGAGCAACCCCAGCTTGCTTCAGTACAAGGACCCATTGCATCAGAACATTAA 1419 0.4285 MMDPSNHSLADGLEAIHQNGIHEEAFNSGKGGVVSNDINPNVAEITDALALNGDFENVVKLDDTATNDSCMGEIKEGSIDNVKSINVTISKEEEVKITIQTKQSRASKGPIKNKNVKPPSPKVIYASGPKKNKDGKDEEAPSGAPNGSLALNNRSRQPIKSRSFNEKQTQVSNESGKSDAAPAEAPMDKKIPKLSRKEPVDEVQGEEESSFTIAEDTKPRRAGALPNYGFSFKCDERAEKRKEFYTKLEEKIHAKEVEKSNLQAKTKETQEAEIKMLRKSLNFKATPMPSFYQEPPPPKVELKKIPTTRAKSPKLGRKKSSSNSEAEGNTGSSSRQGRLSLDEKASQSNFAKVASPVHQKKPQRKSLPPRLQSERTSSSNSKIAGTSAKPKAINERKTIPSVPNKDSTMSNATGEENSTVFSETGEAAPHMEELNALLSDMPSEVVPPVNGDTVVEEQPQLASVQGPIASEH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0856 472 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 462 - -
Sto5g0856 472 MobiDBLite consensus disorder prediction 369 387 - -
Sto5g0856 472 MobiDBLite consensus disorder prediction 183 204 - -
Sto5g0856 472 MobiDBLite consensus disorder prediction 146 177 - -
Sto5g0856 472 MobiDBLite consensus disorder prediction 456 472 - -
Sto5g0856 472 MobiDBLite consensus disorder prediction 317 354 - -
Sto5g0856 472 MobiDBLite consensus disorder prediction 100 228 - -
Sto5g0856 472 Coils Coil 245 265 - -
Sto5g0856 472 MobiDBLite consensus disorder prediction 400 424 - -
Sto5g0856 472 Pfam Targeting protein for Xklp2 (TPX2) domain 230 300 IPR027329 -
Sto5g0856 472 PANTHER PROTEIN WVD2-LIKE 4 2 462 IPR044833 GO:0008017
Sto5g0856 472 MobiDBLite consensus disorder prediction 280 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0856 Sto-Chr5 5731488 5734793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0856 - - gmx:100804879 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0856 5 5731488 5734793 Sto9g3309 9 33110201 33113763 CCT
Sto5g0856 5 5731488 5734793 Sto5g0856 5 5731488 5734793 ECH