Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3297 ATGGCAGAAAAGGCATCGTCGGACATGAGAATAGTGTGGGAACAAGGCGAGGCATTGCAGAAATCCACAACTTTGACGTCAACACTAGTGGCTGATTTGCAAGGCCTATTATTTCCACTCACACATCTTATTCTGTATCTCCTCCCACATGCTGCTCCGTTATCCCACAATCCTTCGCTCACTGATACGAACATGTTTCCTGCTGGAAACTGGTATTCTTTAAACCCTAGCAGGAAGATTTTTACAAGGTTCGGATTGATGGGGAGGAAGGCAATTCAACTATTCGATGACAATAGAGATAGGCTTTTCTCTATCTCTGGTTTGGGCTCCCAATGGAGTCCTCAAGACGGGTATTATCATCCCGGAGGCTTATTTGCCTGCGTGGGTCAGATGGGAATGGGATTCGGCGTTCAACCCAACGCTTCTGATCCCCGCAACAATGGTGACGAGAAACTTCCCTACACTGAATTGTATGTCAAGTATGTGCAATCTCAATCACAGGGGAAAGTTGAGATTTCTGGAGttaaggaggaagaagggattAAGAGCAAGAACAGGAGTGGCCTTAAACTGAAAATTAAGATCAGAAATCCGTCGCTAAGGAGATTGATTAGCGGCGCCATAGCTGGGGCAGTGTCGCGAACCGCCGTGGCACCTTTGGAGACTATAAGGACACATTTAATGGTTGGGAGTAGTGGTCATTCTACTGAGGAGGTGTTTAGCAATATTATGAAGACTGATGGGTGGACAGGATTGTTTAGGGGTAATCTTGTTAATGTTATTCGGGTTGCTCCTAGTAAGGCCATAGAGCTATTTGCTTATGATACAGTCAACAAGAACCTATCACCAAAGTCTGGGGAACAGCCGAAACTCCCTATTCCTGCTTCATTAGTTGCTGGTGCCTGTGCAGGAGTTAGTTCTACTATATGCACATATCCTCTGGAGCTACTCAAGACTCGACTAACTATTCAGAGAGGTGTTTATAATGGTCTACTAGACGCATTCTTAAAAATTGTTCAAGAGGAGGGCCCTGCAGAACTTTATCGAGGCCTTGCTCCCAGCCTTATTGGAGTAATTCCATATGCTGCAACCAATTACTTCGCCTATGACTCTCTACGAAAAGCATATCGAAAAATTTTCAAGCAAGAGAATATTGGCAACATTGAAACCCTATTAATCGGATCAGCAGCTGGTGCTATTTCAAGTAGTGCAACATTTCCACTTGAGGTAGCTCGCAAGCATATGCAAGTGGGAGCACTGAGTGGAAGGCAGGTTTACAAAAATGTGATTCATGCACTAGCAAGCATACTTGAACAAGAAGGGATTCCGGGTTTGTATAGAGGACTAGGACCAAGCTGTATGAAGTTAGTGCCAGCTGCTGGAATCTCTTTTATGTGCTATGAAGCGTGCAAGAGGATATTGGTTGAGAAAGACGAGTTGGAATAG 1446 0.4405 MAEKASSDMRIVWEQGEALQKSTTLTSTLVADLQGLLFPLTHLILYLLPHAAPLSHNPSLTDTNMFPAGNWYSLNPSRKIFTRFGLMGRKAIQLFDDNRDRLFSISGLGSQWSPQDGYYHPGGLFACVGQMGMGFGVQPNASDPRNNGDEKLPYTELYVKYVQSQSQGKVEISGVKEEEGIKSKNRSGLKLKIKIRNPSLRRLISGAIAGAVSRTAVAPLETIRTHLMVGSSGHSTEEVFSNIMKTDGWTGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSPKSGEQPKLPIPASLVAGACAGVSSTICTYPLELLKTRLTIQRGVYNGLLDAFLKIVQEEGPAELYRGLAPSLIGVIPYAATNYFAYDSLRKAYRKIFKQENIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGIPGLYRGLGPSCMKLVPAAGISFMCYEACKRILVEKDELE 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3297 481 ProSiteProfiles Solute carrier (Solcar) repeat profile. 291 375 IPR018108 -
Sto9g3297 481 PRINTS Mitochondrial carrier protein signature 202 215 IPR002067 GO:0055085
Sto9g3297 481 PRINTS Mitochondrial carrier protein signature 215 229 IPR002067 GO:0055085
Sto9g3297 481 PRINTS Mitochondrial carrier protein signature 255 275 IPR002067 GO:0055085
Sto9g3297 481 PRINTS Mitochondrial carrier protein signature 306 324 IPR002067 GO:0055085
Sto9g3297 481 PRINTS Mitochondrial carrier protein signature 348 366 IPR002067 GO:0055085
Sto9g3297 481 PRINTS Mitochondrial carrier protein signature 394 416 IPR002067 GO:0055085
Sto9g3297 481 SUPERFAMILY Mitochondrial carrier 198 469 IPR023395 -
Sto9g3297 481 ProSiteProfiles Solute carrier (Solcar) repeat profile. 385 473 IPR018108 -
Sto9g3297 481 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 112 480 - -
Sto9g3297 481 ProSiteProfiles Solute carrier (Solcar) repeat profile. 197 280 IPR018108 -
Sto9g3297 481 PANTHER SOLUTE CARRIER FAMILY 25 112 480 - -
Sto9g3297 481 Pfam Mitochondrial carrier protein 291 378 IPR018108 -
Sto9g3297 481 Pfam Mitochondrial carrier protein 199 282 IPR018108 -
Sto9g3297 481 Pfam Mitochondrial carrier protein 385 477 IPR018108 -
Sto9g3297 481 Gene3D Mitochondrial carrier domain 194 479 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3297 Sto-Chr9 33036868 33042288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3297 87 479 Organic Solute Cotransporters AT4G32400 67.766 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3297 K14684 - jre:108985127 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0842 5 5663670 5665942 Sto9g3297 9 33036868 33042288 CCT
Sto9g3297 9 33036868 33042288 Sto9g3297 9 33036868 33042288 ECH