Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0842 ATGGATAGGAAAGGACTTCAACTATTTGATGACAAAAGAGATGGATTTTTCTCTGTCTGCGGTTTGGATTCTCAATGGAATCTTCAAGAAGGGTATCATCATCCCGGAGGCTTGTTTGCCAGTGTCGGTCAGGTGGGGATGGGATTCGGTATTCAACCGCAACCCAACCCTTCTGATTCCCGGGACAATGGTGGCGTGAAGTTCCCTTATGCTGAATTGTTCGTCAAGTATGTGGAATCACATGGGAAAGTTCGGATAGCTGGAAtttcagaggaggaggaaggaGTTCAGAGCAAGAAGAAGGGTGGccttaaattgaaaattaaggtaaaaaatCCTTCGCTTAGGAGGTTGATTAGTGGTGCCATAGCTGGGGCAGTGTCCCGCACTACGGTTGCACCATTGGAGACTATAAGGACTCATTTAATGGTGGGGAGTAGTGGCCACTCTACTGGTGAAGTGTTCCAAAATATTATGAAGACTGACGGGTGGAAAGGATTGTTTAGGGGCAATTTTGTTAATGTGATTCGGGTTGCACCTAGTAAGGCCATAGAGCTCTTTGCTTATGATACTGTCAACAAGAACCTATCTCCAAAGCCTGGGGAACAGGCCAAACTCCCTATTCCTGCATCATTGATTGCAGGTGCATGTGCTGGAGTTAGTTCAACTATATTGACATATCCTCTTGAATTACTCAAGACTCGACTAACTATCCAGAGAGATGTTTATAATGGTCTACTTGATGCATTCTTGAAGATAGTTAAAGAAGAAGGCCCTGCTGAACTTTATAGAGGCCTTGCTCCCAGTCTTATAGGTGTAATTCCATATGCTGCCTCCAATTATTTTGCCTATGACACATTAAGGAAAACATACCGTAAAGTTTTTAAGCAGGAGAAGATTGGTAACATTGAGACCCTTTTGATCGGATCAGCAGCTGGTGCTATATCAAGTAGTGCGACCTTTCCACTTGAGGTAGCTCGTAAGCATATGCAAGTAGGTGCTCTCAGTGGAAGGCAGGTTTACAAAAATGTAATTCATGCACTTGCAAGCATAGTTGAACAAGAAGGAATCCAGGGTTTATATAGGGGTTTGGGACCTAGCTGCTTGAAGCTAGTGCCAGCAGCTGGAATCTCTTTTATGTGTTATGAAGCATGCAAGAGGATACTGGTAGAGGAAGAGGACGAGCAATAA 1191 0.4249 MDRKGLQLFDDKRDGFFSVCGLDSQWNLQEGYHHPGGLFASVGQVGMGFGIQPQPNPSDSRDNGGVKFPYAELFVKYVESHGKVRIAGISEEEEGVQSKKKGGLKLKIKVKNPSLRRLISGAIAGAVSRTTVAPLETIRTHLMVGSSGHSTGEVFQNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQAKLPIPASLIAGACAGVSSTILTYPLELLKTRLTIQRDVYNGLLDAFLKIVKEEGPAELYRGLAPSLIGVIPYAASNYFAYDTLRKTYRKVFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASIVEQEGIQGLYRGLGPSCLKLVPAAGISFMCYEACKRILVEEEDEQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0842 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 300 388 IPR018108 -
Sto5g0842 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 195 IPR018108 -
Sto5g0842 396 Gene3D Mitochondrial carrier domain 109 394 IPR023395 -
Sto5g0842 396 PRINTS Mitochondrial carrier protein signature 117 130 IPR002067 GO:0055085
Sto5g0842 396 PRINTS Mitochondrial carrier protein signature 130 144 IPR002067 GO:0055085
Sto5g0842 396 PRINTS Mitochondrial carrier protein signature 170 190 IPR002067 GO:0055085
Sto5g0842 396 PRINTS Mitochondrial carrier protein signature 221 239 IPR002067 GO:0055085
Sto5g0842 396 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
Sto5g0842 396 PRINTS Mitochondrial carrier protein signature 309 331 IPR002067 GO:0055085
Sto5g0842 396 PANTHER SOLUTE CARRIER FAMILY 25 27 395 - -
Sto5g0842 396 SUPERFAMILY Mitochondrial carrier 113 384 IPR023395 -
Sto5g0842 396 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 27 395 - -
Sto5g0842 396 Pfam Mitochondrial carrier protein 206 293 IPR018108 -
Sto5g0842 396 Pfam Mitochondrial carrier protein 300 391 IPR018108 -
Sto5g0842 396 Pfam Mitochondrial carrier protein 113 196 IPR018108 -
Sto5g0842 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 290 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0842 Sto-Chr5 5663670 5665942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0842 1 395 Organic Solute Cotransporters AT4G32400 65.743 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0842 K14684 - jre:108985127 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0842 5 5663670 5665942 Sto9g3297 9 33036868 33042288 CCT
Sto5g0842 5 5663670 5665942 Sto5g0842 5 5663670 5665942 ECH