Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3275 ATGGGTTCTTGCAACGACCAAGAAGTAGAAGCAAAGTGCGTATGGGTTGATGGGCCTATCATCGTAGGCGCTGGCCCCTCTGGCTTAGCCGTGGCAGCTTGCCTTTCTCAACACGGCGTGCCTTCCGTTATTCTCGAGAGAAGCGACTGTATAGCTTCTCTTTGGAAACACAGAACCTACGATCGCCTCAAACTCCACCTCCCCAAGCGCTTCTGCCAGCTCCCTTTCATGCCATTCCCTCCCCACTTCCCAAAATACCCCTCCAAGCACCAGTTCGTCTCCTACATGGAATCCTACGCTTCTCACTTCGCCATTCACCCGCGCTTCAACCAGACCGTTCTCCGAGCCCACTTCGACCCCTCCTCTTCCCTCTGGACCGTCCGAACCCACGATTTCCACTACATTTCTCCCTTCCTCATTGTTGCTTCCGGCGAAAATGCCGAGCCATTCTTTCCTAATATCCCTGGGATCAACAATTTTCATGGACCCATTGCTCACACCAGCGTCTACAGCTCTGGCTCTGATTATAAGAACAAGAAGGTTCTCGTCGTGGGTTGTGGCAATTCTGGTATGGAAGTTAGCTTAGATCTGTGCAGACACAATGCAATCCCTCATATGGTCGTAAGAAACACCGTGCATGTGCTGCCCAGGGAGATGTTTGGGATCTCAACATTTGGAATAGCTATGACGCTCCATAAATGGTTTCCTTTAAGAATAGTAGACAAGTTGCTGTTACTCATGGCTAGCTTCATCCTAGGAAACACCGAAAGGTGCGGTCTCCGTCGGCCCAAGACCGGCCCAATCGAGCTCAAGAACATCACCGGAAAAACCCCTGTTCTTGACGTGGGAGCTCTAGCACAAATCAAATCCGGCAAAATAAAGGTGGTGGAAGGTGTGAAGGAGATAACGAGAAATGGTGCCAGATTTGTGAATGGACAAGAGAAGGAGTTCGATGCTATAATATTGGCAACGGGATACAGAAGCAACGTGCCTACTTGGCTGAAGAGCTGTGATTTTTTCACGGAAGACGGAATGCCGAAAACGCCGTTTCCAAACGGATGGAAGGGAGGGAATGGATTGTATACGGTGGGGTTCACGAGAAGAGGTCTTCTTGGAACCGCCTCGGATGCCATCAACACCGCCCAACACATAGCTGATCAGTGGAAGAGTATGAAGGACAAGAAGAATTACTGTAATTCCCGTTTTATCCTACTCAACACTTCCTGA 1227 0.498 MGSCNDQEVEAKCVWVDGPIIVGAGPSGLAVAACLSQHGVPSVILERSDCIASLWKHRTYDRLKLHLPKRFCQLPFMPFPPHFPKYPSKHQFVSYMESYASHFAIHPRFNQTVLRAHFDPSSSLWTVRTHDFHYISPFLIVASGENAEPFFPNIPGINNFHGPIAHTSVYSSGSDYKNKKVLVVGCGNSGMEVSLDLCRHNAIPHMVVRNTVHVLPREMFGISTFGIAMTLHKWFPLRIVDKLLLLMASFILGNTERCGLRRPKTGPIELKNITGKTPVLDVGALAQIKSGKIKVVEGVKEITRNGARFVNGQEKEFDAIILATGYRSNVPTWLKSCDFFTEDGMPKTPFPNGWKGGNGLYTVGFTRRGLLGTASDAINTAQHIADQWKSMKDKKNYCNSRFILLNTS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3275 408 SUPERFAMILY FAD/NAD(P)-binding domain 20 280 IPR036188 -
Sto9g3275 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 19 38 - -
Sto9g3275 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 180 198 - -
Sto9g3275 408 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 9 405 - -
Sto9g3275 408 Pfam Flavin-binding monooxygenase-like 21 332 IPR020946 GO:0004499|GO:0050660|GO:0050661
Sto9g3275 408 SUPERFAMILY FAD/NAD(P)-binding domain 177 386 IPR036188 -
Sto9g3275 408 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 9 405 - -
Sto9g3275 408 Gene3D - 19 394 IPR036188 -
Sto9g3275 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 18 40 - -
Sto9g3275 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 137 145 - -
Sto9g3275 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 176 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3275 Sto-Chr9 32909768 32911711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3275 K11816 - jre:109001759 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0806 5 5478483 5480487 Sto9g3275 9 32909768 32911711 CCT
Sto9g3275 9 32909768 32911711 Sto9g3275 9 32909768 32911711 ECH