Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0806 ATGGGATCTTCCaaagaacaagaacaagaacGAGGGCAACCAAAATGTGTGTGGGTTCACGGGCCTATCATCATAGGCGCAGGTCCCTCCGGTTTAGCTGTGGCTGCCTGCCTATCTCAACACGGAGTACCTTGTGTCATTCTTGAGAAGACTCACTGCATTGCTTCTCTATGGAAACACAGAACCTACGACCGTCTCAAACTCCACCTCCCCAAACACTTCTGCCAGCTTCCCTTTATGCCTTTCCCTCCCAATTTCCCAAAGTACCCCTCCAAATACCAGCTCATCTCCTACCTCCACTCCTATGCTTCGCGCTTCTCAATTCACCCCCGGTTCAACCAGGCCGTCACGACCGCCCAGTTCGACCCTCTCTCCGGTTTCTGGACGGTTCGGACACAGGATTTTCACTACATTTCCCCCTGGCTTGTAGTGGCCACCGGAGAGAATGCAGAGCCGGTGATTCCTAGAATCACGGGATTGGACGTGTTTGGAGGACCCGTTGTTCATACTAGCGCCTACAAGTCTGGCTGTGAGTATAAAAACCGGAGGGTTTTGGTGATTGGGTGTGGTAACTCTGGTATGGAAGCAAGTTTGGATCTTTGTCGACACAGTGCCTTCCCTTTTATGGTTGCCAGGAACACTGTACATGTTCTGCCTAGGGAGATGTTTGGGTTGTCAACATTTGGAATAGCCATGGCCCTCCTCAAATGGTTTCCTTTAAGATTAGTGGACAAGCTCCTCCTAATGGCCACCAGTTTCGTATTGGGGAACACCGATCGGTACGGTCTCCGGCGTCCCAAAACTGGACCCTTTGAGCTCAAAAACGCCACCGGAAAAACCCCTGTTCTGGATGTTGGGGCTTTAGCTCAAATCAAATCTGGCAAAATTAAGGTGATGGAAGGAGTGAAGGAGATTACTAGAAACGGCGCAAAGTTTGTGGATGGTCAAGAAAAAGAGTTTGATGCTATAATCTTAGCAACGGGATACAGAAGCAACGTGCCTACTTGGCTCAAGGGATGTGATTTATTCACAGAAGATGGAATGCCGAAAACGCCCTTTCCAAACGGTTGGAAAGGAGAGAATGGATTGTATACGGTGGGGTTCAGCAGAAGAGGTCTGCTTGGAACGGCTTCTGATGCCACGAAGATCGCACAAGACATCGCTAATCAATGGACCACTCTCAAGGACACCAATAACTACCGTAATTCCCATATTATTCTACTCAAGAATTCGTAA 1236 0.4838 MGSSKEQEQERGQPKCVWVHGPIIIGAGPSGLAVAACLSQHGVPCVILEKTHCIASLWKHRTYDRLKLHLPKHFCQLPFMPFPPNFPKYPSKYQLISYLHSYASRFSIHPRFNQAVTTAQFDPLSGFWTVRTQDFHYISPWLVVATGENAEPVIPRITGLDVFGGPVVHTSAYKSGCEYKNRRVLVIGCGNSGMEASLDLCRHSAFPFMVARNTVHVLPREMFGLSTFGIAMALLKWFPLRLVDKLLLMATSFVLGNTDRYGLRRPKTGPFELKNATGKTPVLDVGALAQIKSGKIKVMEGVKEITRNGAKFVDGQEKEFDAIILATGYRSNVPTWLKGCDLFTEDGMPKTPFPNGWKGENGLYTVGFSRRGLLGTASDATKIAQDIANQWTTLKDTNNYRNSHIILLKNS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0806 411 Gene3D - 21 393 IPR036188 -
Sto5g0806 411 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 12 404 - -
Sto5g0806 411 SUPERFAMILY FAD/NAD(P)-binding domain 180 382 IPR036188 -
Sto5g0806 411 SUPERFAMILY FAD/NAD(P)-binding domain 23 283 IPR036188 -
Sto5g0806 411 PRINTS Pyridine nucleotide disulphide reductase class-II signature 21 43 - -
Sto5g0806 411 PRINTS Pyridine nucleotide disulphide reductase class-II signature 140 148 - -
Sto5g0806 411 PRINTS Pyridine nucleotide disulphide reductase class-II signature 179 203 - -
Sto5g0806 411 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 12 404 - -
Sto5g0806 411 Pfam Flavin-binding monooxygenase-like 24 334 IPR020946 GO:0004499|GO:0050660|GO:0050661
Sto5g0806 411 PRINTS FAD-dependent pyridine nucleotide reductase signature 22 41 - -
Sto5g0806 411 PRINTS FAD-dependent pyridine nucleotide reductase signature 183 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0806 Sto-Chr5 5478483 5480487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0806 K11816 - zju:107431492 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0806 5 5478483 5480487 Sto9g3275 9 32909768 32911711 CCT
Sto5g0806 5 5478483 5480487 Sto5g0806 5 5478483 5480487 ECH