Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3267 ATGCTCAAGCAATTCCTCAGTAAGCTTCCTCGGAAGTCTTCCAAATTTGACGGGGAGGACAACTCAGTAGCTGCTTCACCACGCGTCACCGGTAGGGCTAATCGGTCGAACAGTGGGAGTTCTTCCAGTCGATCCAATGCTCCGAAACGCACTTCTTCATCGGCGGTTTTCCCAGCGAGCATCGTTTCTGGGATCGAGCCCTTGGTGCCGTTCAAAGATGTGCCAAATGTGGAAAAGATAAACCTGTTTGTGAGCAAGTTGAGCCTTTGTTGCGTAACATTCGATTTCACTGACGCCGGTAAGAATATCGTGGAAAAAGATGTTAAAAGGCAAACTTTGCTTGAACTTGTCGATTTTGTCGCTTCTGGGTCGACGAAATTCAGTGAACCTGCTATTCTTGCTATGAGCAAAATGTGTGCTATTAATCTCTTTAGAGTTTTTCCGCCTCATTATAGGTCCAATGGAAGTGGTGCTGGTGGCGAGAATGATGATGACGAGCCAGTATTTGATCCTGCTTGGCCACATTTACATATTGTGTATGAATTGTTGCTTAAATTTATTACTTCTCCGTGTCTTGATGCTAAGGTGGCGAAAAAGTATATCGACCATTCATTTATTTCAAGATTGCTTGACTTGTTTGAATCAGAGGATCCAAGAGAAAGAGACTGCTTGAAGACTATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCACAGGCCCTATGTTCGAAAAACTATTAACAACATATTTTACCGGTTTGTCTTTGAGTCTGAGAAACACAATGGCATTGCTGAATTATTGGAGATTTTTGGGAGCATAATTAGTGGGTTTGCCTTACCTCTGAAAGAAGAACACAAAATCTTCTTATGGAGGGTTTTAATCCCTTTGCACAAGCCAAAATCTTTGGGTGTTTATTTCCAACAATTGTCATATTGTGTTATACAATTTGTAGAGAAGGAGCCAAAACTAGCTAGCACTGTGATAAGGGGATTGTTAAGATATTGGCCAATAACAAACAGTCAGAAGGAGGTGATGTTCTTGGGTGAACTGGAAGAGATTTTGGAAGCAATCAACATGGTAGAGTTCCAGAGGGTCATGGTCCCATTGTTTTGGCGGATTGGTTGTTGCATTAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTCTTCTTATGGAACAATGACCATATTGTGAATTTGATTGCACATAACCGTCAGGTGATCCTACCCATTGTATTTCCAGCTTTAGAGAGAAACGCTCAGAACCACTGGAACCAAGCAGTGCTGAACTTAACTCTTAATATTAGAAAGATGTTCATAGAGATGGATGAGAAGCTCTTTGTGTCATGCCATTCTCACTTTAAGGAAGAAGAAGCATTTCTAAGCTCAGCAGCTGAGAAGCGAAAAGAAGCGTGGGAACGACTAGAGCATGCAGCTAGTCTCCAGCCTATGATTGGAAATACCGCTGTTTTAGTGTCCCCTTTGATAACTTGA 1494 0.4224 MLKQFLSKLPRKSSKFDGEDNSVAASPRVTGRANRSNSGSSSSRSNAPKRTSSSAVFPASIVSGIEPLVPFKDVPNVEKINLFVSKLSLCCVTFDFTDAGKNIVEKDVKRQTLLELVDFVASGSTKFSEPAILAMSKMCAINLFRVFPPHYRSNGSGAGGENDDDEPVFDPAWPHLHIVYELLLKFITSPCLDAKVAKKYIDHSFISRLLDLFESEDPRERDCLKTILHRVYGKFMVHRPYVRKTINNIFYRFVFESEKHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSLGVYFQQLSYCVIQFVEKEPKLASTVIRGLLRYWPITNSQKEVMFLGELEEILEAINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIVFPALERNAQNHWNQAVLNLTLNIRKMFIEMDEKLFVSCHSHFKEEEAFLSSAAEKRKEAWERLEHAASLQPMIGNTAVLVSPLIT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3267 497 PIRSF PP2A_B56 6 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
Sto9g3267 497 MobiDBLite consensus disorder prediction 1 51 - -
Sto9g3267 497 MobiDBLite consensus disorder prediction 27 51 - -
Sto9g3267 497 SUPERFAMILY ARM repeat 81 474 IPR016024 -
Sto9g3267 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
Sto9g3267 497 Gene3D - 75 478 IPR011989 -
Sto9g3267 497 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 493 - -
Sto9g3267 497 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 70 479 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3267 Sto-Chr9 32859826 32862320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3267 K11584 - gmx:100781390 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0794 5 5416865 5419538 Sto9g3267 9 32859826 32862320 CCT