Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0794 ATGCTGAAGCAATTTCTTAGTAAGCTTCCTCGGAAGTCATCCAAATCCGACTCAAATGAGTCAAATCGGAGCGATTCTTCACGTTCCAGCTCATTGCAGGACGCTTCAGCACGCGTTACCGGTAGGAATAATCGATCAAGCGTTGGGAATTCTTCCAGTCGATCCAACACTGCGAAACGCACATCTTCGTCAGCAGTTTTTCCGGCAAGCATTGTGTCCGGTATCGAACCCTTGGTGCCATTCAAAGATGTACCCAATGCGGAGAAGATGAACCTGTTTGTGAGCAAATTGAGCCTTTGTTGTGTTACCTTTGATTTTACTGATCCCGGTAAAAATATCGTGGAGAAAGATGTCAAAAGGCAAACTTTGCTTGAACTTGCCGATTTTGTGGCTGCAGGGTCAATGAAATTCAGTGAACATGCTATATTTGCTATGTGCAAAATGTGCTCTATCAATCTCTTTAGAGTATTCCCACCTAATTATCGGTCCAATGGGGGTAGTGCTGGTGGcgaaaatgatgatgatgagccaAGTTTTGATCCTGCTTGGCCACATTTACATATTGTGTATGATTTGATGCTTAAATTTATTACTTCTTCCTGCCTTGACACTAAGGTAGCGAAGAAGTACTTTGACCattcatttatttcaaaattgcTTGACTTGTTTGATTCAGAGGATCCAAGAGAAAGAGACTGCTTGAAGACAATTCTGCATAGGGTTTACGGGAAGTTCATGGTGCATAGGCCCTATATTCGAAAATCTTTGAACAATATATTTTATCGCTTTGTGTTTGAGACTGAGAAACACAATGGAATTGCTGAACTATTGGAGATTTTTGGGAGTATAATCAGTGGGTTTGCTTTACCTTTGAAAGAGGAACACAAAATCTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCAAAATCTGTGGGGATTTATTTTCAGCAATTATCCTACTGTGTCACACAGTTTATAGAAAAGGAGCCGAAGTTAGCAAGCACTGTGATAAGAGGTTTGTTAAAATATTGGCCAATAACAAATAGTCAGAAAGAGGTGATGTTCTTGGGTGAACTGGAAGAGATTTTGGAAGTAATCAACATGGTAGAGTTCCAAAGGGTCATGGTTCCATTGTTTTGGCGGATTGGGTACTGCATTAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTTTTCTTGTGGAATAACGACCATATTGTCAACTTGATTGCACATAATCGTCAGGTGATCCTTCCCATAATATTTCCAGCTTTAGAGAGGAACTCTCAGAACCACTGGAACCATGCAGTGCTCAACTTAACTCTTAATATTAGAAAGCTATTCTTGGAAATGGATGAGAAGCTCTTCCTGGCTTGTCATACTCTCTTTAAGGAAGAAGAAGCAGCTCTAAGCTTAGCAGCCGAGCAGCGAAAGGAAGCATGGAAACAACTCGAGCATGCAGCCAGTCTGCAGCCTGTAATTGGAAATACCCCCGTCTTGGTTTCCCTTTGA 1515 0.4079 MLKQFLSKLPRKSSKSDSNESNRSDSSRSSSLQDASARVTGRNNRSSVGNSSSRSNTAKRTSSSAVFPASIVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNIVEKDVKRQTLLELADFVAAGSMKFSEHAIFAMCKMCSINLFRVFPPNYRSNGGSAGGENDDDEPSFDPAWPHLHIVYDLMLKFITSSCLDTKVAKKYFDHSFISKLLDLFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSLNNIFYRFVFETEKHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSVGIYFQQLSYCVTQFIEKEPKLASTVIRGLLKYWPITNSQKEVMFLGELEEILEVINMVEFQRVMVPLFWRIGYCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALERNSQNHWNHAVLNLTLNIRKLFLEMDEKLFLACHTLFKEEEAALSLAAEQRKEAWKQLEHAASLQPVIGNTPVLVSL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0794 504 Gene3D - 85 488 IPR011989 -
Sto5g0794 504 SUPERFAMILY ARM repeat 91 485 IPR016024 -
Sto5g0794 504 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
Sto5g0794 504 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 503 - -
Sto5g0794 504 PIRSF PP2A_B56 2 500 IPR002554 GO:0000159|GO:0007165|GO:0019888
Sto5g0794 504 MobiDBLite consensus disorder prediction 23 61 - -
Sto5g0794 504 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 80 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
Sto5g0794 504 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0794 Sto-Chr5 5416865 5419538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0794 K11584 - gmx:100775273 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0794 5 5416865 5419538 Sto9g3267 9 32859826 32862320 CCT
Sto5g0794 5 5416865 5419538 Sto5g0794 5 5416865 5419538 ECH