Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3255 ATGGGAGGAGTGAGAAAATGGAGGGTTTTTGTGGTCTTGTTGTTCAGTGTTGTGTTGGTGGGTAGAGTGAGAGGAATTGGTGTGAATTGGGGGACACAGGCAACACACCCTCTGCCACCATCCACAGTAGTAAAACTGCTAAAAGACAATGGAATTCAGAAGGTGAAGCTATTTGATGCAGACTCTAATACTCTGGATGCTCTGAAGAAGTCAGGGATACAAGTGATGGTGGGTATTCCCAATGATATGCTCTCTTCACTTGCTAACAGTGTAGAAGCTGCTGAAAAATGGGTTTCCAAGAATGTTTCAGCTCATGTATCTTCTGGCGGAGTCGACATCAGGTATGTTGCAGTAGGGAATGAACCTTTCTTATCAACATACAATGGCAGCTTTGAATCCACAACTCTTCCAGCTCTTCAAAACATCCAATCAGCACTCATCAAATCTGGTTTGGCCAACCATGTCAAAGTCACCGTCCCTCTGAATGCCGACGTCTATCAGAGTTCGTCGGAAAAGCCTTCCGACGGGGACTTCCGGCCGGACATACATGACCTAATGCTGCAGATTGTCAAGTTCTTGAGTGACAATGGAGCCCCATTCGCAGTCAACATCTACCCATTCATCAGCTTATACAAAGATGCAAACTTTCCAGTTGACTATGCCTTCTTCAACGGTTATCAGAGTGGTATAAACGACAATGGGAAGGTTTACGACAACGTGTTTGATGCCAACCATGACACCCTTGTGTGGGCATTACAGAAGAATGGGTTTGGAAACTTACCCATAATTGTAGGAGAAATAGGGTGGCCTACAGATGGAGACAAAAATGCAAATCTTCAATATGCTCAACGATTCAACCAAGGCTTCATGTCTCGCTATGTTTCTGGAAAAGGGACTCCAATGAGGCCTGGTCCTGTAGATGCCTACTTGTTCAGCCTCATTGATGAAGATGACAAGAGCATTCAACCTGGAAATTTTGAACGCCATTGGGGGTTGTTTTACTTTGATGGTCAACCCAAATACCAGCTGAGTTTTGGGTCATCAAGGAATGGTTTAGTGGGGGCTAGTGGTGTGCATTATCTGGCCAAGAAGTGGTGTGTTTTGAAGCCTTCAGCGAACCTTAATGATGAGCAAGTGGCACCAAGTGTGGCTTATGCATGTGAGAATGCAGATTGCACTAGTCTTGGATATGGGACTTCCTGTGGGAATTTGGATACAAGGGGTAATATTTCTTATGCATTTAATAGCTATTACCAGGTGAATGATCAGCTTGATAGTGCTTGTAAGTTCCCAGGCCTTTCCATCGTCACTGACAAAGATCCTTCTGTTGGAGACTGCAAATTCAGAATCATGATCCAGACAGATTCTGCTCACCCACATGCCACACTTGGGTCTTATTCTTACACCATGTTGCTgcttctattctttttttttactgtcCTGTAA 1446 0.4378 MGGVRKWRVFVVLLFSVVLVGRVRGIGVNWGTQATHPLPPSTVVKLLKDNGIQKVKLFDADSNTLDALKKSGIQVMVGIPNDMLSSLANSVEAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGSFESTTLPALQNIQSALIKSGLANHVKVTVPLNADVYQSSSEKPSDGDFRPDIHDLMLQIVKFLSDNGAPFAVNIYPFISLYKDANFPVDYAFFNGYQSGINDNGKVYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDKNANLQYAQRFNQGFMSRYVSGKGTPMRPGPVDAYLFSLIDEDDKSIQPGNFERHWGLFYFDGQPKYQLSFGSSRNGLVGASGVHYLAKKWCVLKPSANLNDEQVAPSVAYACENADCTSLGYGTSCGNLDTRGNISYAFNSYYQVNDQLDSACKFPGLSIVTDKDPSVGDCKFRIMIQTDSAHPHATLGSYSYTMLLLLFFFFTVL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3255 481 Gene3D - 360 458 - -
Sto9g3255 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 459 IPR044965 GO:0004553|GO:0005975
Sto9g3255 481 Pfam X8 domain 364 433 IPR012946 -
Sto9g3255 481 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Sto9g3255 481 Pfam Glycosyl hydrolases family 17 26 345 IPR000490 GO:0004553|GO:0005975
Sto9g3255 481 SUPERFAMILY (Trans)glycosidases 26 345 IPR017853 -
Sto9g3255 481 SMART X8_cls 364 448 IPR012946 -
Sto9g3255 481 Gene3D Glycosidases 24 351 - -
Sto9g3255 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 13 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3255 Sto-Chr9 32766717 32768735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3255 10 476 Glycoside Hydrolase AT4G31140 72.163 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3255 K19893 - gmx:100796552 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3255 9 32766717 32768735 Sto5g0772 5 5232206 5234767 CCT