Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0772 ATGGAAGGTGAGAAAGTGGGTAGGCTTATTCTTGCTCCTTTGTTCTTCACTGTGGTGTTAATGGGTTTTGCTAGTGGGATTGGTGTGAATTGGGGCACACAGTCAACACACCCTTTGGGAGCATCCACGGTGGTGAAAATGCTGAAAGATAATGGGATTCAGAAGGTTAAGCTTTTTGATGCTGATCCAAGTATTTTAGATGCTCTAAAGAAGTCTGGGATTCAAGTGATGGTGGGTATTCCTAATGATATGCTTTATACACTTGCTAACAGTATGCAAGCTGCTGAAAAATGGGTTGCAAAAAACGTCTCCTCTCATATGTCTTCTTCTGGTGGAGTAGACATCAGGTATGTTGCAGTGGGGAACGAACCTTTCTTGTCAACTTACAATGGCACCTTTGAAGCCACAACTCTTCCGGCTCTCCAAAACATCCAGATTGCTCTCACAAAAGCCAAATTGAACAATCGTGTTAAAGTCACCGTCCCTCTAAACGCCGATGTATACCAGAGTTCATCAGATAAGCCTTCTGATGGCGATTTCCGGACTGACATCCACGATCTCATGATACAGATTGTCAAGTTCTTGAATGACAATGGAGCTTCATTTACTGTCAACATCTACCCATTCATCAGCCTCTATAACGACCCCAATTTCCCGGTGGACTACGCCTTCTTCAACGGCTATCAGTCTTCTATAAACGACAATGGCAGGGTCTATGACAACGTGTTCGATGCTAACCATGACACCCTTGTCTGGGCACTGCAGAAGAATGGCTATCCAAACTTGCCTATAATTGTTGGAGAAATCGGGTGGCCTACCGATGGAGACCGAAATGCGAATCTTCAGTATGCCCAGCGCTTCAACCAAGGCTTCATGTCTCGCTACCTGGCGGGAAAAGGGACTCCGATGAGGCCTGGTCCTTTAGATGCATACTTGTTCAGCTGGATAGATGAGGATTTCAAAAGCATTCAGCCGGGGAACTTTGAACGTCATTGGGGGCTATTTTACTATGATGGACAACCCAAGTACCAGCTTACTCTTGGAAGAACAAATGGGTTGGTGGGTGCAAGTGGGGTTCATCATCTGGCTAAAAAATGGTGTGTTTTGAAACCATCAGCGAACCTTAATGACGATCAGGTGGCTCCAAGTGTGGCTTATGCTTGCCAAAATGCAGATTGTACGAGTCTCGGGTATGGAACTTCGTGTGGGAATTTAGACGTTCGCACTAATATTTCTTATGCTTTTAACAGCTACTTCCAAGTGAATGATCAGATTGATAGTGCCTGCAAGTTCCCAGGTCTTTCTGTTGTCACCGACCAAGATCCTTCCGTCGGGGATTGCAAGTTCAGAATCATGATCCAGACGGATTCTGCTGGGAGGCTTGAATCTCTTAGAATAGTGCTCTTTGTCTTTTTGTTTTTCACTCTTctgtag 1434 0.4477 MEGEKVGRLILAPLFFTVVLMGFASGIGVNWGTQSTHPLGASTVVKMLKDNGIQKVKLFDADPSILDALKKSGIQVMVGIPNDMLYTLANSMQAAEKWVAKNVSSHMSSSGGVDIRYVAVGNEPFLSTYNGTFEATTLPALQNIQIALTKAKLNNRVKVTVPLNADVYQSSSDKPSDGDFRTDIHDLMIQIVKFLNDNGASFTVNIYPFISLYNDPNFPVDYAFFNGYQSSINDNGRVYDNVFDANHDTLVWALQKNGYPNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYLAGKGTPMRPGPLDAYLFSWIDEDFKSIQPGNFERHWGLFYYDGQPKYQLTLGRTNGLVGASGVHHLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGYGTSCGNLDVRTNISYAFNSYFQVNDQIDSACKFPGLSVVTDQDPSVGDCKFRIMIQTDSAGRLESLRIVLFVFLFFTLL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0772 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 18 459 - -
Sto5g0772 477 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Sto5g0772 477 Gene3D Glycosidases 26 352 - -
Sto5g0772 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 459 IPR044965 GO:0004553|GO:0005975
Sto5g0772 477 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Sto5g0772 477 SMART X8_cls 365 449 IPR012946 -
Sto5g0772 477 Gene3D - 362 458 - -
Sto5g0772 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Sto5g0772 477 Pfam X8 domain 365 434 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0772 Sto-Chr5 5232206 5234767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0772 14 464 Glycoside Hydrolase AT4G31140 69.365 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0772 K19893 - gmx:100796552 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3255 9 32766717 32768735 Sto5g0772 5 5232206 5234767 CCT