Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3015 atggaaggaaagaacaagaagaaggtGGGGAATGAATTGGGTTGTGGTTTTATGGGAGGGATTTTCCATCTCAGAAGCTACTGGCTGAGAAAATCATCTGTGCATTCACTACCCATGAGGCCTACCAACAGCGAATCTAAGGCCACTCCCACTGAGACACACAAAACAAGTGCGAGAAAGAGCACCTCCGGCCATCGGAGATCTTCCGACGCTGCAAGAAGCTCAACATCCTCCTTAGCCCAAACAAAGATTCAACACAACGATGCAAACAAGATACAGAGAGAGCCTAATGGTAACTCTCTGGAGCTTGCTAGGATAAGTACTCATAAACAGCGAGAAATTGAGAATAAATCACCTCTCAGACTCACTGGTAATTTGCTTGTAAATAGCAGCCCAAGAATTAGTATGGAAAGCCTTCCTAAAAGTAAAGATGTGAACTCTGTTCTCAACCCTCACAATAACGCCGGCATAGGCGTAATGGGGAATATCATGAGGAGGAACGGCGATGAGATAGCGCAATTCCGAAGTCCGAGGAACAGAGTAGAGCCAGAGGTATTGAAGACGATGGGGAATGAAGCATATAAGCAGGGAAGATTCGAAGAGGCTTTGGCTTTGTATGAGCGAGCCATTGCTATTGATTCAAATAAGGCAACGTATCGTTGCAATAAGAGTGCAGCTTTAATAGGTTTGGGACGCCTTGTGGAAGCCATTGTTGAATGCCAGGAAGCCATACGGCTGGACCCTTCCTATAACAGACCCTTTCACCGTTTGGCAACCATATATCTCAGATTGGGAGAAGCAGAAAAAGCACTAATTTACAATGATAAAACCTCATATTCTGATTCCGTACTCGCTTTCCAAGCACGCTCTATTCAGAATCACCTTCAGAAATGCACTGAAGCTCGGAAAGTCGATGATTGGGAAGCTGTACTCAAGGAAACACAGTCTGCGATATCACTGGGTGCTGATTCAAGTCCACAGGTTTATGCTCTACAAACGGAAGCCTTACTTAAGCTCTTCAGATATCAAGAGGCATATGCTACCTACGAGAAAATGCCCAAATTTGCCCTGAATTGGTGTACCAAATTATTTGGTCTCGCTCGTAGTGCTTATCTGTTCATGATTGGCGCCCAGGTTTATTTGGCGGCTGGCAGGTTTGAGGAGGCGGTGACAGCAGGTGAGCAAGCAAGTAAACTTGATCCAAGTGACAAAGAGGTGAATAGAGTGGTAAAGAGGGCGAGAGCAGTGGCATCAGCGAGACTGAGTGGTAACTTACTGTTCAAGGCATCCAAATACATGGAAGCATGTGGTGTATACAAGGAAGGACTAGAGCAGGATCCATACAACTCAGTTCTACTGTGCAACAGAGCAGCATGCCATTGGAAGCTAGGCCAGTTTGAGAAGGCTATTGAGGATTGTAATGCAGCCCTTGCAGTTCAGCCTAGTTATAGCAAGGCACGGTTAAGGAGGGCAGATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCGGTTCAAGACTATGAAATGCTGTTAAGAGAAAAGCCAGGGGATGAGGAGGTGGGGAGGGCTCTGTTTGAGGCCCAGCTCCAACTCAAGATGCTGCGTGGGGAAGACATTAAGGACTTCAAGTTTGGGTCTAATCTGGTTTTTATATCCAGCAATGATCGGTTTAGACATTATGTAACCTCACCAGGGATGTCTGTGGTGCTGTTTTGCAACAAGGAAACACACAAGCAAGTATTGCTAGTGTTGGAGCAAACGTGCAAGAGATACCCATCTGTTAATTTCCTCAAGGTAGAGATAGAAAACCATCCGTACTTGGTGAAATCAGAAGGTGTGCGGTGTGTGCCGGCCTTCAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTCCAGGGAACAAGCACGAGTTGTTAGAGAGATCAGTTAAATTGTATAGTTTAGCAGCTGAAGATAAACAAAAGTGTGCAGATGGATAG 1980 0.4475 MEGKNKKKVGNELGCGFMGGIFHLRSYWLRKSSVHSLPMRPTNSESKATPTETHKTSARKSTSGHRRSSDAARSSTSSLAQTKIQHNDANKIQREPNGNSLELARISTHKQREIENKSPLRLTGNLLVNSSPRISMESLPKSKDVNSVLNPHNNAGIGVMGNIMRRNGDEIAQFRSPRNRVEPEVLKTMGNEAYKQGRFEEALALYERAIAIDSNKATYRCNKSAALIGLGRLVEAIVECQEAIRLDPSYNRPFHRLATIYLRLGEAEKALIYNDKTSYSDSVLAFQARSIQNHLQKCTEARKVDDWEAVLKETQSAISLGADSSPQVYALQTEALLKLFRYQEAYATYEKMPKFALNWCTKLFGLARSAYLFMIGAQVYLAAGRFEEAVTAGEQASKLDPSDKEVNRVVKRARAVASARLSGNLLFKASKYMEACGVYKEGLEQDPYNSVLLCNRAACHWKLGQFEKAIEDCNAALAVQPSYSKARLRRADCNAKLERWEAAVQDYEMLLREKPGDEEVGRALFEAQLQLKMLRGEDIKDFKFGSNLVFISSNDRFRHYVTSPGMSVVLFCNKETHKQVLLVLEQTCKRYPSVNFLKVEIENHPYLVKSEGVRCVPAFKIYKNGSRVKEIPGNKHELLERSVKLYSLAAEDKQKCADG 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3015 659 MobiDBLite consensus disorder prediction 36 57 - -
Sto9g3015 659 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 645 - -
Sto9g3015 659 Pfam Thioredoxin 582 639 IPR013766 -
Sto9g3015 659 Gene3D Tetratricopeptide repeat domain 182 535 IPR011990 GO:0005515
Sto9g3015 659 MobiDBLite consensus disorder prediction 36 102 - -
Sto9g3015 659 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 645 IPR044534 -
Sto9g3015 659 SMART tpr_5 370 403 IPR019734 GO:0005515
Sto9g3015 659 SMART tpr_5 416 449 IPR019734 GO:0005515
Sto9g3015 659 SMART tpr_5 217 250 IPR019734 GO:0005515
Sto9g3015 659 SMART tpr_5 450 483 IPR019734 GO:0005515
Sto9g3015 659 SMART tpr_5 183 216 IPR019734 GO:0005515
Sto9g3015 659 SMART tpr_5 484 517 IPR019734 GO:0005515
Sto9g3015 659 SUPERFAMILY TPR-like 183 405 IPR011990 GO:0005515
Sto9g3015 659 MobiDBLite consensus disorder prediction 68 102 - -
Sto9g3015 659 Pfam Tetratricopeptide repeat 452 483 IPR001440 GO:0005515
Sto9g3015 659 Pfam TPR repeat 190 223 - -
Sto9g3015 659 ProSiteProfiles TPR repeat profile. 370 403 IPR019734 GO:0005515
Sto9g3015 659 Pfam Tetratricopeptide repeat 377 449 - -
Sto9g3015 659 ProSiteProfiles TPR repeat profile. 183 216 IPR019734 GO:0005515
Sto9g3015 659 Coils Coil 490 510 - -
Sto9g3015 659 SUPERFAMILY TPR-like 421 532 IPR011990 GO:0005515
Sto9g3015 659 Gene3D Glutaredoxin 543 654 - -
Sto9g3015 659 SUPERFAMILY Thioredoxin-like 539 639 IPR036249 -
Sto9g3015 659 CDD TRX_family 557 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3015 Sto-Chr9 31128503 31131098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3015 K09527 - gmx:100782846 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0488 5 3104526 3106988 Sto9g3015 9 31128503 31131098 CCT
Sto9g3015 9 31128503 31131098 Sto9g3015 9 31128503 31131098 ECH