Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2997 ATGTTGTTAGGGAAGAGACCCCGTCCTCCAATGAAGAGAACCACCAGCATGTCCGAAATAACCTTGGATCTGAACGCTCCACCGCCCGATCCGGCTAATTCCCCGAACCCTAACACGCAGAGACAAGCCGATGCTCCACGAAAACAGCCAGTTAGGGCCAATTGGTTAGATCAAACTGCGAACCGTACAAGGAATTCCGCCGATTTCATTGAAACCGCTGAGTCTGACTTCCTTCGTGCTTGCTCTCTCTGCAAACGTCGCTTGGTACCTGGCCGCGACATCTACATGTACAGGGGTGATAGTGCTTTCTGCAGTCAAGAATGCCGTCAGAAGCAGATGATTCAGGATGAGAGGAAGGAGAAGCGTTGTTTGGCATCCGGTAAACAAGCGGTGGCTCAGCCTTCTGGATCTCGGGTTACTACCACCAAAGGCGAAAGCGTGGTTGCTTTGTAA 453 0.5166 MLLGKRPRPPMKRTTSMSEITLDLNAPPPDPANSPNPNTQRQADAPRKQPVRANWLDQTANRTRNSADFIETAESDFLRACSLCKRRLVPGRDIYMYRGDSAFCSQECRQKQMIQDERKEKRCLASGKQAVAQPSGSRVTTTKGESVVAL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2997 150 Pfam zinc-finger of the FCS-type, C2-C2 71 119 IPR007650 -
Sto9g2997 150 PANTHER FCS-LIKE ZINC FINGER 5 1 146 - -
Sto9g2997 150 MobiDBLite consensus disorder prediction 131 150 - -
Sto9g2997 150 MobiDBLite consensus disorder prediction 1 59 - -
Sto9g2997 150 ProSiteProfiles Zinc finger FLZ-type profile. 76 120 IPR007650 -
Sto9g2997 150 PANTHER FCS-LIKE ZINC FINGER 5 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2997 Sto-Chr9 30948832 30949419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2997 - - aprc:113852663 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0477 5 3030783 3031286 Sto9g2997 9 30948832 30949419 CCT
Sto9g2997 9 30948832 30949419 Sto9g2997 9 30948832 30949419 ECH