Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0477 ATGCTGTTAGGGAAGAGAGGTCGTGGTCCAATGAAGAGAACCACAAGCATGTCAGAAATAAGTGCGGCGGCCAGCACGGAAGTGGATGCGAAGCGTGAAGGTGGGTCAGATGAGAGGCAGAGGGCGTTGATGATGAGAAACCATAGAAGGCATTCCGCAGATTTCATAGAAACCCCAAATACTACTACTGACTTCTTGCGTGCTTGTTCTCTCTGCAAACGTCCTTTGCTACCCACCCGAGACATCTACATGTACAGCAGAGGTGATGCTGCTTTCTGCAGTCTAGAGTGCCGTCAACAGGCCATGAATCACGATGAAAGGAAGGACAAGTACTGTTCCTTGATGCCGTCAAAGAAAAAACTAGTCCTTCTGCCTCCTTCTCCTGCATCCAAACTCGTCTCTACCAATGGCGAAACCGTTGCTGCTTTGTAA 432 0.4907 MLLGKRGRGPMKRTTSMSEISAAASTEVDAKREGGSDERQRALMMRNHRRHSADFIETPNTTTDFLRACSLCKRPLLPTRDIYMYSRGDAAFCSLECRQQAMNHDERKDKYCSLMPSKKKLVLLPPSPASKLVSTNGETVAAL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0477 143 MobiDBLite consensus disorder prediction 1 38 - -
Sto5g0477 143 ProSiteProfiles Zinc finger FLZ-type profile. 64 109 IPR007650 -
Sto5g0477 143 PANTHER FCS-LIKE ZINC FINGER 5 1 142 - -
Sto5g0477 143 Pfam zinc-finger of the FCS-type, C2-C2 59 108 IPR007650 -
Sto5g0477 143 PANTHER FCS-LIKE ZINC FINGER 5 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0477 Sto-Chr5 3030783 3031286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0477 - - mesc:110606164 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0477 5 3030783 3031286 Sto9g2997 9 30948832 30949419 CCT
Sto5g0477 5 3030783 3031286 Sto5g0477 5 3030783 3031286 ECH