LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto9g2987	ATGCTGCGCCGCCTCTCTGGAAAAAGTGATGAAGGTTCCATTAACAATTCTGATGATGAAAGCAAGAATGCTTTTGAAACCTCAAAAGAATTGGATTGTAAGGAGGCTTCTGAGAAAAAATTTGCTTGGAACCCCCTAAATTATATTAGGATGTCATCTGATGTTGGTTTGGAAGATCAAAATGAACGGAGGGATCCAATAACTGAAGGTCCACAACATCCCATAGCCATGAAAGGAAGGATTATACTCTACACAAGACTAGGGTGCCAGGAATGTAAAGAGGCTAGGCTATATTTGTATATGAAACGGCTTAAATATGTTGAAATCAACATTGATGTGTACCCTAGTAGAAAGCAGGAGCTAGAGAAGATTTCTGGATCCACTTCTGTTCCCAAGGTGTTTTTCAATGAAATACTTATTGGAGGTTTGGATGAACTAATGGCCTTGGACAAGTCTGGCAGGCTAGATGAGAAGATTGAATTTCTCATTACTGAAGCGCCATCAGTTGAGGCTCCATTACCACCTCTTTCTGGAGAAGATGATGAATCTAGCAGTGGAGTTCTTGATGAAATGGCTTTAATTGTCAGCAAAATGAAAGAATTTATTGTTGTTAAGGACCGATTTTACAAAATGCGCAGGTTCACCAACTGTTTTCTTGGCTCAGAAGCTGTAGACTTCTTATCAGAAGATCAATATTTGGAAAGGCCAGAGGCTGTTGAGTTTGCACGAAATCTTGCCAGCAATTTCTTCTTTCAACATGTTCTTGATGAGAATCTATTTGAGGATGGCAATCAGTTGTATCGGTTTTTGGATGATGATCCAATTGTGACTTCTCAATGTCAAAATATTCCGAGGGGCATAACCACTGTGAAGCCCAAGCCGATAGCTGAAATTGCGTCAAGGCTGAGGTTTCTGTCTTATGCAATATTTGAAACTTATGCCTCTGAAGATGGACTCCATGTTAATTACAGAAGCCTCCATGGAAGCGAGGAGTTTGCaagGTATCTGAGAATAGTCGAGGAGCTCCAAAGAGTGGAAATATGGGATATGTCTAGAGAAGAGAAGCTCGCTTTCTTTATTAACCTTTATAATATGATGTCCATCCATGCAATCTTAGCATGGGGTCATCCAGCTGGAGCACTGGAAAGAAGGAAACTGTTTGGAGACTTCAAATATGTAATTGGTGGGTCAACCTACTCACTATCAGCTATTCAAAATGGCATTTTAAGGGGAAACCAGCGACCACCATATAATCTTATGAAGCCCTTCGGTGCAAAAGATAAACGTTCAAGGGTAGCTCTTCCATACCCTGAACCTCTTGTTCATTTTGCTTTAGTATGTGGTAGCAGATCTGGGCCTGCACTTCGATGCTATTCTCCTCGAGATATTGACAAAGAATTGATGGATGCTGCCCGCAATTTCTTGAGAAACGGTGGACTAGTCATTGATTTGAATACAAAGGTTGCATGTGCTAGTAAGATCCTCAAGTGGTTTAGTGTAGATTTTGGCAAAAACGATGCAGAGGTACTGAAGCATGTTTCAAACTACTTAGATCCAGCTGACTCAGCAGTATTATTGGACTTGCTTGCCTCATCCGAGCTGAAGCTCACATATTACCCTTACGACTGGGGTTTGAACTGCTAG	1644	0.41	MLRRLSGKSDEGSINNSDDESKNAFETSKELDCKEASEKKFAWNPLNYIRMSSDVGLEDQNERRDPITEGPQHPIAMKGRIILYTRLGCQECKEARLYLYMKRLKYVEINIDVYPSRKQELEKISGSTSVPKVFFNEILIGGLDELMALDKSGRLDEKIEFLITEAPSVEAPLPPLSGEDDESSSGVLDEMALIVSKMKEFIVVKDRFYKMRRFTNCFLGSEAVDFLSEDQYLERPEAVEFARNLASNFFFQHVLDENLFEDGNQLYRFLDDDPIVTSQCQNIPRGITTVKPKPIAEIASRLRFLSYAIFETYASEDGLHVNYRSLHGSEEFARYLRIVEELQRVEIWDMSREEKLAFFINLYNMMSIHAILAWGHPAGALERRKLFGDFKYVIGGSTYSLSAIQNGILRGNQRPPYNLMKPFGAKDKRSRVALPYPEPLVHFALVCGSRSGPALRCYSPRDIDKELMDAARNFLRNGGLVIDLNTKVACASKILKWFSVDFGKNDAEVLKHVSNYLDPADSAVLLDLLASSELKLTYYPYDWGLNC	547

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto9g2987	547	SMART	DEP_3	198	271	IPR000591	GO:0035556
	Sto9g2987	547	PANTHER	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE	1	546	-	-
	Sto9g2987	547	Gene3D	Glutaredoxin	76	161	-	-
	Sto9g2987	547	Pfam	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	203	269	IPR000591	GO:0035556
	Sto9g2987	547	SUPERFAMILY	Thioredoxin-like	75	159	IPR036249	-
	Sto9g2987	547	PANTHER	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE	1	546	-	-
	Sto9g2987	547	ProSiteProfiles	Glutaredoxin domain profile.	69	166	-	-
	Sto9g2987	547	Pfam	Protein of unknown function, DUF547	349	475	IPR006869	-
	Sto9g2987	547	PRINTS	Glutaredoxin signature	81	99	IPR014025	-
	Sto9g2987	547	PRINTS	Glutaredoxin signature	123	136	IPR014025	-
	Sto9g2987	547	PRINTS	Glutaredoxin signature	137	150	IPR014025	-
	Sto9g2987	547	ProSiteProfiles	DEP domain profile.	198	271	IPR000591	GO:0035556
	Sto9g2987	547	Pfam	Glutaredoxin	81	137	IPR002109	-
	Sto9g2987	547	MobiDBLite	consensus disorder prediction	13	34	-	-
	Sto9g2987	547	CDD	DEP	194	268	-	-
	Sto9g2987	547	SUPERFAMILY	"Winged helix" DNA-binding domain	198	279	IPR036390	-
	Sto9g2987	547	MobiDBLite	consensus disorder prediction	1	34	-	-
	Sto9g2987	547	Gene3D	-	189	312	IPR036388	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto9g2987	Sto-Chr9	30879126	30881819	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto9g2987	-		-	jre:109007267	838.565

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g0458	5	2856108	2865454	Sto9g2987	9	30879126	30881819	CCT
	Sto9g2987	9	30879126	30881819	Sto9g2987	9	30879126	30881819	ECH