LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto5g0458	ATGGGAAAAGAGTTAGGAGAGAGACACGGAGCAAATTCTCAAGGTGTTGAAAAGCAGGAAGGAGAGAATGTAACACTTCAGAATGAAGATTTAGACGATGCTGTTGGAAAATCTGATGTTGCTCAAAGGATTGATGAGACTAAAGGTTCGCCATGTAAATCTCAACAAGAAAATTTAGAGACCACTACTGCACTAGTTGACTCTTGTCACAAGGTGCCCGAGACTGAGAGTACTGTCATGAAATCTGAAATTCAAAATGAATTTGTCCGTAGTTTCAGTCAAGATTACTCTAGTTACAAGGTGGATGAGATTGGAGATTCGGAGTCTAATATCCAAGAGGAAAATGTAGATAAAGTGTCTAAACAAAATGGCTTGGAAGATAATAGGAACCTAGAAACAACACAAATGAATCAACAGGAAGATGAATTCCCAAGTGAGGACAGTGATTTGGAACCTGTATTTGATGGAACGGAGGATACTGTGATGGAAGCTGGAAATTTCAAATCTTCCCGTTCTTTGGAAGCTCACCAGGAAAATCAGGGTGTAGTTGGGAAGGCATTGGCACTTAAAAATATTGTCAGGCAGAAAAGTTTAGTAGCAGTTTCCACTCTGCTGCGTCGCCTTTCAGGAAAATGGGATGAAGGCAAGAATGTTTCATGTTCATTAAAACGCAGTGAATCCAAAGATGTTTCAGAGAAGGCAGTGGAGAGAGATGCTTTTAGTACTGAAGGGCCACAGCAACCATTGGCAATGAAAGGAAGGGTTATACTGTACACAAGGCTAGGGTGCAAAGAATGTAAAGAGGCTAGGCTATTTTTGCACATGAGAAGACTTAGATATGTAGAAATCAACATTGATGTGTACCCTAGTAGAAAGCTGGAACTGGAGAAGATTTCTCGGTCTGCTTCTGTTCCAAAGGTGTTTTTCAATGAAATACTTATTGGAGGCCTGAGTGAGCTAAAGGCCTCAAATGAGTCTGGCGAGCTTGATGAGAAGATTGACTTTCTCATTATTGAAGCCCCATCATTTGAAGCACCATTACCACCCTTTTCTGCAGAGGATGATGCGTCCAATACTGGAGCTCCTGATGAGATGGCTCTAGTTGTCCGCAAAATGAAAGAAACTATTGTTGTGAAGGACCGATTTTGCAGAATGCAGAGGTTCACCAAGAGTTTTCTTGGCTCAGAAGCTGTGGACTTTTTATCAGAAGATCAATACTTGGAAAGAAAAGATGCTATTGAATTTGCACGAAAGCTTGTGATCAAACTTTTCTTTCGGCATGTTCTTAATGAGAATCTATTTGAGGATGGTAATCACTTGTATAGGTTTTTGGATGACGATCCCATTGTGGCTTCTCGTTGTCACAACATTCCGAGGGGTATAACTACTGTGAAGCCCAAGCCTATAGCAGAAATTGCATCAAGGCTGAGTTTTCTGTCCAATGCAATGTTTGAAGCCTATGCTTCTGAAGATGGATGTCATATTGATTACAGAAGTCTCCATGGAAGTGAGGAATTTGCAAGGTATCTGAGAATAGTGGAGGGGCTCCAAAGAGTGGAAATATGGGAGATGTCTAGAGAAGAGAAGCTTGCTTTCTTTATTAATCTGTATAATATGATGGCCATCCATGCAATCTTAGTTTGGGGTCATCCATCTGGAGCACTGGATAGAAGGAAAATGTTTGGAAGCTTCAAATATGTCATCGGTGGGTACACCTACTCACTTTCATCTATTCAAAATGGCATTTTGAGGGGAAACCAGAGACCTCCATATAACCTTATGAAACCATTTGGTGCAGGAGATAAACGTTCACGGGTGGCTCTCCCTTATCCTGAGCCTCTTATTCATTTTGCTTTAGTAAGTGGTACTCGATCTGGCCCTGCGCTTCGATGCTATTCTGCTAGGAACATTGACGGAGAATTAATGGAAGCGGCCCGCCAATTCTTAAGAAATGGGGGGCTTACAGTTTATTTGAATGCAAAGGTTGCATATGCTAGTATGATCCTTAAGTGGTTTAGTGTAGACTTTGGCAATGAGGAGGTGGAGGTACTGAAGCATGTGTCCAACTACTTAAACCCAGCTGACTCCACAGTATTACTGGACCTGCTTGCCACTTCTGAGTTGAAGGTGGTTCTTGTGCCTGAAAATGCTAATAACGGAGCTGACACGTTGAAGGGCAATAGTATACCAACTATGAATCTGAATATGGAGAGACACAAGCCAAGAGGTAGCCACATGAAGAAAgccagagaagaagaaggggttgGTCTAAAAGCTAATCTTCCATCATGGAAAATCAGTGCTTCAAAGCCTTCACACCCAACATCTTCTAAGAAGAATTTGGGCAGAGCAGCAGAGCCAATTCTGAAAGTCTTCTTTTTAACCCCAAAAAAGGTTAAGAAAACCATAATGGAGAACCCCATGGGACTTTGTTCTCCAAGCAGCCACACCAAAGGGATTAGGAAGATTATATTGACGAAGAATTCTAAAGAAATGGTGAGCTTAATTAATGACTACAGTTCATCTGAATGCAAAGGTTGCATATGCTAA	2550	0.4098	MGKELGERHGANSQGVEKQEGENVTLQNEDLDDAVGKSDVAQRIDETKGSPCKSQQENLETTTALVDSCHKVPETESTVMKSEIQNEFVRSFSQDYSSYKVDEIGDSESNIQEENVDKVSKQNGLEDNRNLETTQMNQQEDEFPSEDSDLEPVFDGTEDTVMEAGNFKSSRSLEAHQENQGVVGKALALKNIVRQKSLVAVSTLLRRLSGKWDEGKNVSCSLKRSESKDVSEKAVERDAFSTEGPQQPLAMKGRVILYTRLGCKECKEARLFLHMRRLRYVEINIDVYPSRKLELEKISRSASVPKVFFNEILIGGLSELKASNESGELDEKIDFLIIEAPSFEAPLPPFSAEDDASNTGAPDEMALVVRKMKETIVVKDRFCRMQRFTKSFLGSEAVDFLSEDQYLERKDAIEFARKLVIKLFFRHVLNENLFEDGNHLYRFLDDDPIVASRCHNIPRGITTVKPKPIAEIASRLSFLSNAMFEAYASEDGCHIDYRSLHGSEEFARYLRIVEGLQRVEIWEMSREEKLAFFINLYNMMAIHAILVWGHPSGALDRRKMFGSFKYVIGGYTYSLSSIQNGILRGNQRPPYNLMKPFGAGDKRSRVALPYPEPLIHFALVSGTRSGPALRCYSARNIDGELMEAARQFLRNGGLTVYLNAKVAYASMILKWFSVDFGNEEVEVLKHVSNYLNPADSTVLLDLLATSELKVVLVPENANNGADTLKGNSIPTMNLNMERHKPRGSHMKKAREEEGVGLKANLPSWKISASKPSHPTSSKKNLGRAAEPILKVFFLTPKKVKKTIMENPMGLCSPSSHTKGIRKIILTKNSKEMVSLINDYSSSECKGCIC	849

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto5g0458	849	MobiDBLite	consensus disorder prediction	722	747	-	-
	Sto5g0458	849	Pfam	Protein of unknown function, DUF547	523	649	IPR006869	-
	Sto5g0458	849	MobiDBLite	consensus disorder prediction	1	15	-	-
	Sto5g0458	849	CDD	DEP	369	442	-	-
	Sto5g0458	849	ProSiteProfiles	DEP domain profile.	372	445	IPR000591	GO:0035556
	Sto5g0458	849	PANTHER	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE	11	711	-	-
	Sto5g0458	849	MobiDBLite	consensus disorder prediction	32	46	-	-
	Sto5g0458	849	SUPERFAMILY	Thioredoxin-like	248	334	IPR036249	-
	Sto5g0458	849	MobiDBLite	consensus disorder prediction	111	125	-	-
	Sto5g0458	849	Gene3D	Glutaredoxin	250	335	-	-
	Sto5g0458	849	ProSiteProfiles	Glutaredoxin domain profile.	243	340	-	-
	Sto5g0458	849	Gene3D	-	364	491	IPR036388	-
	Sto5g0458	849	Pfam	Glutaredoxin	255	311	IPR002109	-
	Sto5g0458	849	SMART	DEP_3	372	445	IPR000591	GO:0035556
	Sto5g0458	849	MobiDBLite	consensus disorder prediction	1	59	-	-
	Sto5g0458	849	PANTHER	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE	11	711	-	-
	Sto5g0458	849	Pfam	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	376	443	IPR000591	GO:0035556
	Sto5g0458	849	SUPERFAMILY	"Winged helix" DNA-binding domain	366	452	IPR036390	-
	Sto5g0458	849	MobiDBLite	consensus disorder prediction	106	130	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto5g0458	Sto-Chr5	2856108	2865454	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto5g0458	-		-	ccaj:109814814	865.144

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto5g0458	5	2856108	2865454	Sto9g2987	9	30879126	30881819	CCT
	Sto5g0458	5	2856108	2865454	Sto5g0458	5	2856108	2865454	ECH