Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2708 ATGTTCGCATCCGCTCTCTTGAACACCAACACCGACGCTCCCATCATCTCCGCCGGCGGCGGAGGCAGGTTCTGGTTAATGGCAGCGGCTACCACGCCGTCCACCTCGGCGGTGGTGATCACGGCCTTGGCTGGGGTGGCTCTCGTCGCTGTGATTTTCTACGGTGCCAGTAGAGGCCGCCTTAAATCACCATGGTCACGCAGGAAACGAAAACATGTCCTTTCACCACAGCAGTGGAAAAGCTTGTTTACTGAAGATGGGAGGCTCCGTGATGGTggaattaagtttttgaaaagaGTTCGCAGTGGAGGTGTTGATCCTAGTATTAGGGCTGAAGTTTGGCCGTTTCTACTTGGAGCCTATGACTTGGACAGcaccaaagaagaaagagatgtTATAAGAACTCAAAATAGAAAGAAATATGAGAAACTCCGCAGACAATGCCGGAAATATCTAAAGCATGGCAATGAGAGCTTTAAGTTAAATGAAATTGGTGGAGCTGGCAGTGAAGGTGATAGTGGGAGTCTCATTCAATACTCTGGTTCTCCTAGTTCTGAAGATGTTATCAGTGCCAGGGAATCCCTTTCTAGTGAGGAGAGGAGCCCGGATGTTGAGTACTCGGATGATCCATCCAGTGCACTGgttgaaggagatgatgtttCTAATGTCAACAATGCTGATGTCTCTGCACTGGATACTGATTCTTATGATTCTGATTCATCAGAAGGTCCCGAGGTTATCCAGACTTTTGCCCCTGTGGATGGTCAGGAGGAGAATGATCCCAAGACAGCTTCCAAGGAAGATTCTTCTCCTTCCCAAACAAATGCCCCTTCTAAACTTAAAGCAAATGAAGATTTTGCAACATGGCAGCGGATCATTCGACTTGATGCAGTACGTGCCAATGCAGAGTGGATGCCATACTCTCCCTCTCAAGCTACAATATCTGAGAGTAGAGCACGCCGATCTGCTGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGAGCCCAGCAGAATCTTCCATGCTGCCCGTCTTGTTGCTATCCTTGAGGCGTATGCGCTGTACGACCCTGAGATTGGTTACTGCCAAGGCATGAGTGATCTCCTATCTCCTATAATTAGCGTTATACCAGAGGATCATGAGGCTTTCTGGTGTTTTATTGGATTCATGAAGAAGGCACGGCAGAATTTTAGACTTGATGAGGTAGGTATAAGGAGGCAACTTAATATTGttgctaaaataataaaatttaaggatTCCCACCTATATAGGCACTTGGAGAAGCTGGAGGCGGAGGATTGCTTTTTTGTTTACAGGATGGTTGTGGTATTGTTCAGAAGGGAATTGACATTTGAACAGACTCTTTGCCTCTGGGAAGTGATGTGGGCAGATCAAGCAGCTATTAGGGCAGGTATTGGAAAATCTGCATGGAGCAGAATAAGGCAGCGTGCTCCACCAACAGAGGATTTATTGCTTTATGCAATAGCGGCCTCAGTATTGCAGAGGAGGAAACTGATTATTGAGAAGTATAGCAGCATGGATGAAATCATAAGGGAATGCAATGGTATGGCAGGACATTTAGATGTTTGGAAACTGCTAGATGATGCACATAACTTGGTGGTCACTCTTCATGACAAAATAGAGACCTCATTTCGAAAAAATAAGCACGCTATAACTCTGAGCTCTGCTACTACAACTAGCCACCGCATCTATGCAAGGCTTAGATGCCATCATGACACAGATCTGAGAACTCTAGAACACCATTGCGAAGAGCAGGATATTTTAGAAATGGGTGCAGAGACTGGGGAAGGATATTACTGGATTTCATCTCATTTCCAGCCATTGGTCAAGTTCAAATCAATGTTTTATGAGTTGAGTAGGCTGATTTTCACCCATTCTTTCAGTTTCTGA 1911 0.4417 MFASALLNTNTDAPIISAGGGGRFWLMAAATTPSTSAVVITALAGVALVAVIFYGASRGRLKSPWSRRKRKHVLSPQQWKSLFTEDGRLRDGGIKFLKRVRSGGVDPSIRAEVWPFLLGAYDLDSTKEERDVIRTQNRKKYEKLRRQCRKYLKHGNESFKLNEIGGAGSEGDSGSLIQYSGSPSSEDVISARESLSSEERSPDVEYSDDPSSALVEGDDVSNVNNADVSALDTDSYDSDSSEGPEVIQTFAPVDGQEENDPKTASKEDSSPSQTNAPSKLKANEDFATWQRIIRLDAVRANAEWMPYSPSQATISESRARRSAEAVGLKDYGHLEPSRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIISVIPEDHEAFWCFIGFMKKARQNFRLDEVGIRRQLNIVAKIIKFKDSHLYRHLEKLEAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTEDLLLYAIAASVLQRRKLIIEKYSSMDEIIRECNGMAGHLDVWKLLDDAHNLVVTLHDKIETSFRKNKHAITLSSATTTSHRIYARLRCHHDTDLRTLEHHCEEQDILEMGAETGEGYYWISSHFQPLVKFKSMFYELSRLIFTHSFSF 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2708 636 ProSiteProfiles TBC/rab GAP domain profile. 104 465 IPR000195 -
Sto9g2708 636 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 402 540 IPR035969 -
Sto9g2708 636 MobiDBLite consensus disorder prediction 250 281 - -
Sto9g2708 636 MobiDBLite consensus disorder prediction 161 225 - -
Sto9g2708 636 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE ISOFORM X1 19 547 - -
Sto9g2708 636 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 19 547 - -
Sto9g2708 636 Gene3D - 401 548 - -
Sto9g2708 636 MobiDBLite consensus disorder prediction 192 206 - -
Sto9g2708 636 MobiDBLite consensus disorder prediction 173 191 - -
Sto9g2708 636 SMART tbc_4 101 510 IPR000195 -
Sto9g2708 636 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 79 425 IPR035969 -
Sto9g2708 636 Pfam Rab-GTPase-TBC domain 344 464 IPR000195 -
Sto9g2708 636 MobiDBLite consensus disorder prediction 266 281 - -
Sto9g2708 636 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 265 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2708 Sto-Chr9 29035191 29039633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2708 - - gmx:100789579 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2708 9 29035191 29039633 Sto5g1327 5 9049909 9053309 ECH
Sto9g2708 9 29035191 29039633 Sto9g2708 9 29035191 29039633 ECH