Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1327 atgTTCACATCGTCTCACTTGAGTACCAATAGCGGTAACAACAGCGACGCTTCCATTTTCTCCATCGCCGGCGTACACGGGTTCTCGTTAATGGCGGACGCAGCGTCGCCCTATACCTTGACGACGGTCTTCACGGCTTTGGCTGGGGTGGCTCTGGCGGCTGTGATTTTCTACGGTGCCAGTAGTGGTCGGCTTAAATCACCATGGTCACGCCGTAAAAGAAAACATGTGCTTTCACCTCAGCAGTGGACAAGCTTGTTTACAGAAGATGGGAGATTTCGAGATGGTGGTATTAAGTTCTTGAAAAGAGTTCGCAGTGGAGGTGTCGATCCTAGTATTCGGGCTGAAGTTTGGCCATTTCTACTAGGAGTCTATGACTTGGGCAGCACCGGAGAAGAAAGAGATGTTATAAGAGCTCACAATAGAAAGCAATATGCAAAACTCCGCAGACGATGCTGGCAACTCCTAAATAACAGTACTGGGAGCTTTAAGTTAAATGAAATTGATGGAATCTGCTATGAAAGAGATAGTGGGACTCTCATTCAAGAGCCCAGTTCTCCTAGTTCTGAAGATGCAACCAGTGCTAGGGATTCCCTTTCTAGCGAGGAAAGGAGTCCAGAGGTTGAATACTCTGATGATCCATCCAGTGCACTGTTGGAAGGAGATGATGCTTCTGATGTCTTTAATGCTGATGCATCTGCACTGGATACTGATTACTCTGATTCAGACTCCTCTGAAGGACCGGAGGTCATTCGGACTTTCCCCTCTGTGGATGGTCTAGAAGAGAATGATCTCAAGACAGCATCCAAGGAAGATTCTTCTCCTCCTCAGACAAAAGTCGCATTGAAACCAGTAAGTAATGAGGATTTTTCCACATGGCAACGGATTATACGACTTGATGCCATACGTGCCAACACAGAATGGATACAATACTCCCCCTCTCAAGCTGCAATACCAGAGAATAGGGCAAACCGTGCTGCTGAGGCTGTTGGCTTGAAAGATTATGGTCACCTTGAGCCCAACAGAATTTTCCATGCTGCCCGTCTAGTTGCTATACTTGAAGCATATGCATTATATGACCCCGAAATTGGCTACTGCCAGGGTATGAGTGATCTACTATCTCCTATAGTTAGTGTTATATCAGAGAATCATGAAGCTTTCTGGTGTTTTGTTGGCTTTATGAAGAAGGCAAGGCAGAATTTTAGGCTTGACGAGGTGGGTATTAGGAGGCAACTAAATATTGTTgcaaaaattatcaaattcaaGGACCCCCACTTATATAGGCACTTGGAGAAGCTCCAGGCTGAGGATTGCTTTTTCGTTTATAGGATGGTGGTGGTATTGTTTAGAAGGGAATTGTCATTTGAACAGACTCTTTGCCTCTGGGAAGTTATGTGGGCAGATCAAGCAGCGATCAGGGCAGGCATCGGAAAATCGGCATGGAGCAGAATAAGGCAGCGGGCTCCACCAACAGAAGATTTATTGCTTTATGCAATAGCTGCTTCAGTATTACAAAGGAAGAAGCTGATTATTGAGAAGTATAGCAGCATGGACGAGATCATAAGGGAATGCAATGGCATGGCTGGACACTTGGACGTTTGGAAACTGCTAGATGATGCACATAACTTGGTGGTCACTCTTCATGAGAAAATAGAGACATCATTCCAGTGA 1671 0.4506 MFTSSHLSTNSGNNSDASIFSIAGVHGFSLMADAASPYTLTTVFTALAGVALAAVIFYGASSGRLKSPWSRRKRKHVLSPQQWTSLFTEDGRFRDGGIKFLKRVRSGGVDPSIRAEVWPFLLGVYDLGSTGEERDVIRAHNRKQYAKLRRRCWQLLNNSTGSFKLNEIDGICYERDSGTLIQEPSSPSSEDATSARDSLSSEERSPEVEYSDDPSSALLEGDDASDVFNADASALDTDYSDSDSSEGPEVIRTFPSVDGLEENDLKTASKEDSSPPQTKVALKPVSNEDFSTWQRIIRLDAIRANTEWIQYSPSQAAIPENRANRAAEAVGLKDYGHLEPNRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIVSVISENHEAFWCFVGFMKKARQNFRLDEVGIRRQLNIVAKIIKFKDPHLYRHLEKLQAEDCFFVYRMVVVLFRRELSFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTEDLLLYAIAASVLQRKKLIIEKYSSMDEIIRECNGMAGHLDVWKLLDDAHNLVVTLHEKIETSFQ 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1327 556 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 93 429 IPR035969 -
Sto5g1327 556 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 406 544 IPR035969 -
Sto5g1327 556 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 18 551 - -
Sto5g1327 556 Gene3D - 405 552 - -
Sto5g1327 556 PANTHER SMALL G PROTEIN SIGNALING MODULATOR 2-LIKE ISOFORM X1 18 551 - -
Sto5g1327 556 MobiDBLite consensus disorder prediction 179 195 - -
Sto5g1327 556 MobiDBLite consensus disorder prediction 235 249 - -
Sto5g1327 556 SMART tbc_4 105 514 IPR000195 -
Sto5g1327 556 MobiDBLite consensus disorder prediction 235 261 - -
Sto5g1327 556 MobiDBLite consensus disorder prediction 196 210 - -
Sto5g1327 556 Pfam Rab-GTPase-TBC domain 348 468 IPR000195 -
Sto5g1327 556 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 268 401 - -
Sto5g1327 556 ProSiteProfiles TBC/rab GAP domain profile. 108 469 IPR000195 -
Sto5g1327 556 MobiDBLite consensus disorder prediction 179 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1327 Sto-Chr5 9049909 9053309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1327 - - gmx:100789579 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2708 9 29035191 29039633 Sto5g1327 5 9049909 9053309 ECH
Sto5g1327 5 9049909 9053309 Sto5g1327 5 9049909 9053309 ECH