Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2669 ATGGGTGAGGAAGCTAAACAGGAACAACCCATAGcagaggagaagaaggaagagaaagcagaggagaagaaggaagagaaaacagaggaaaagaaagaagagaaaacagaggaaaaaccagaggaggaggagaagaaggaagagcCTAAACCACCATCACCATGTGTGCTGTCTGTGGACTTGCACTGTGTGGGATGTTCTAAGAAAATTGAGAAATACATTATGAAAATGAGAGGAGTTGAAGGAGTGGTCACTGATATGACTAAAAATGAAGTAACCATAAAGGGAATAGTGGAACCACAGGCAATCTGCAATGTCATTACCAAGAAAACTAAGAGAAGAGCCAAAGTTATTTCCCCTTTGCCAGCAGCAGAAGGAGAACCTATACCAGAAGTTGTTACTTCTCAGGTTAGTGGACCTGTAACTGTGGAACTTAATGTAAACATGCACTGTGAAGCTTGTGCTGAGCAACTCAAGAAGAAAATACTCAAAATGAGAGGAGTGCAAACAGCAGTGACAGAGCTAAGCACAGGGAAGGTTATGGTGACAGGGACGATGGATGCTAACAAGTTAGTGGAATATAATGTGGTTGTAGCCATTGATGATGAGGGAATGAAGAGGATGATGTACTATTACCAGCCACTGTATGTGATTGAACGAATCCCACCTCCTCAGCTCTTCAGTGATGAAAATCCCAATGCATGCTGCATTTCATAA 717 0.3556 MGEEAKQEQPIAEEKKEEKAEEKKEEKTEEKKEEKTEEKPEEEEKKEEPKPPSPCVLSVDLHCVGCSKKIEKYIMKMRGVEGVVTDMTKNEVTIKGIVEPQAICNVITKKTKRRAKVISPLPAAEGEPIPEVVTSQVSGPVTVELNVNMHCEACAEQLKKKILKMRGVQTAVTELSTGKVMVTGTMDANKLVEYNVVVAIDDEGMKRMMYYYQPLYVIERIPPPQLFSDENPNACCIS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2669 238 MobiDBLite consensus disorder prediction 1 51 - -
Sto9g2669 238 SUPERFAMILY HMA, heavy metal-associated domain 57 110 IPR036163 GO:0046872
Sto9g2669 238 ProSiteProfiles Heavy-metal-associated domain profile. 61 109 IPR006121 GO:0046872
Sto9g2669 238 Coils Coil 11 45 - -
Sto9g2669 238 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 194 IPR044258 GO:0046872
Sto9g2669 238 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 200 238 IPR044258 GO:0046872
Sto9g2669 238 Pfam Heavy-metal-associated domain 146 193 IPR006121 GO:0046872
Sto9g2669 238 Pfam Heavy-metal-associated domain 57 106 IPR006121 GO:0046872
Sto9g2669 238 SUPERFAMILY HMA, heavy metal-associated domain 137 193 IPR036163 GO:0046872
Sto9g2669 238 Gene3D - 138 206 - -
Sto9g2669 238 Gene3D - 53 116 - -
Sto9g2669 238 ProSiteProfiles Heavy-metal-associated domain profile. 148 209 IPR006121 GO:0046872
Sto9g2669 238 MobiDBLite consensus disorder prediction 1 54 - -
Sto9g2669 238 CDD HMA 56 116 IPR006121 GO:0046872
Sto9g2669 238 CDD HMA 144 184 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2669 Sto-Chr9 28838121 28840044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2669 - - cam:101491779 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1375 5 9408112 9409936 Sto9g2669 9 28838121 28840044 CCT
Sto9g2669 9 28838121 28840044 Sto9g2669 9 28838121 28840044 ECH