Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1375 ATGGGAGAGGAAGCCAAACAGGAACAACCCGAGGCAGAGGTCAAACCagCAGcagaggagaagaaggaagaagaagagccCAAACCACCATCACCATGTGTGCTGTTTGTGGACTTGCATTGTGTGGGATGTGCCAAGAAGATTCACAGATCCATTCTCAAGATCAGAGgaGTTGAAGGAGTGGTCATTGATATGGCTAAAAATGAAGTGACCATAAAGGGAATTGTGGATCCTCAAGCAATCTGCAACATAATCACCAAGAGAATTAAGAGAAGTGCCAAAATCATATCTCCATTGCCTCAAGCCGAAGGAGAATCCATACCAGAAGTTGTTACCtctcagGTTAGTGCACCAATAACCGTAGAACTTAATGTGAACATGCACTGTGAGGCCTGTGCTGAGCAACTGAAGAGGAAGATTCTTAAAATGAGAGGAGTGCAAAAGGCAGAAACAGAGTTTAGTACAGGGAAGGTGACAGTGATGGGGACGATGGATGGAGAGAAGCTAGTGGATTATGTGTATAGAAGAACCAAAAAGCAAGCAAAAATAGTGCCACAAGCTGCAGAGCCAGAAGCTGATaaggAGAATAATAAAGAGGAAAAAGGAGGTGGTGAAGAAGAAGCAGTGGTAGACGATATTGTGATGAATGATAATAATGTGGAAGATGAAGGGTTGAAGAGGATGATGTACCATTATTACCAGCCACTCTATGTGGTTGAAAGAATCCCTCCTCCTCAGCTCTTCAGTGATGAAAACCCAAATGCATGTTgcatttcttaa 780 0.4038 MGEEAKQEQPEAEVKPAAEEKKEEEEPKPPSPCVLFVDLHCVGCAKKIHRSILKIRGVEGVVIDMAKNEVTIKGIVDPQAICNIITKRIKRSAKIISPLPQAEGESIPEVVTSQVSAPITVELNVNMHCEACAEQLKRKILKMRGVQKAETEFSTGKVTVMGTMDGEKLVDYVYRRTKKQAKIVPQAAEPEADKENNKEEKGGGEEEAVVDDIVMNDNNVEDEGLKRMMYHYYQPLYVVERIPPPQLFSDENPNACCIS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1375 259 MobiDBLite consensus disorder prediction 1 30 - -
Sto5g1375 259 MobiDBLite consensus disorder prediction 188 208 - -
Sto5g1375 259 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 259 IPR044258 GO:0046872
Sto5g1375 259 SUPERFAMILY HMA, heavy metal-associated domain 120 175 IPR036163 GO:0046872
Sto5g1375 259 ProSiteProfiles Heavy-metal-associated domain profile. 39 87 IPR006121 GO:0046872
Sto5g1375 259 ProSiteProfiles Heavy-metal-associated domain profile. 126 160 IPR006121 GO:0046872
Sto5g1375 259 Pfam Heavy-metal-associated domain 35 80 IPR006121 GO:0046872
Sto5g1375 259 Pfam Heavy-metal-associated domain 124 170 IPR006121 GO:0046872
Sto5g1375 259 CDD HMA 122 162 IPR006121 GO:0046872
Sto5g1375 259 Gene3D - 116 183 - -
Sto5g1375 259 Gene3D - 32 94 - -
Sto5g1375 259 CDD HMA 39 87 IPR006121 GO:0046872
Sto5g1375 259 SUPERFAMILY HMA, heavy metal-associated domain 34 87 IPR036163 GO:0046872
Sto5g1375 259 MobiDBLite consensus disorder prediction 183 208 - -
Sto5g1375 259 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1375 Sto-Chr5 9408112 9409936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1375 - - ccaj:109790710 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1375 5 9408112 9409936 Sto9g2669 9 28838121 28840044 CCT
Sto5g1375 5 9408112 9409936 Sto5g1375 5 9408112 9409936 ECH