Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2603 ATGACCACAACATTTCCAACGCTTTTCCTTAACCGTAAATCGCGCTCTAAATCAAGGGAGGGCCATCGACATGACGAGCTCAGTTTCACCTGCATCCTCTTGCACGGCGTCCTCTCATTGTTCGCACTTGTTGCAATGGACGAAACCCGGGAATCAGCCGCCCAAGGGGTTCCGGGAACGCCTGGCATAAGGGAAGTAAGATCCGAACCGAGGTCCGAAAATCTCGAACCCGGAGCTCGAACCGGTGAGAACCCGAGTCTGGGAATAAGAATGGTGAATTGCAGAGCTGAAATCGATACGTCGCCGCCGTTCGGATCAGTCAAGGAGGCTGTGACTCGTTTTGGAGGTAGCGGGCCTTGGTTACCTCTTTACAAGCTTGGGGAGGCTTTTAACAACATTGAAGATTTTGACATAAAGAAAGTGGAGGAACAAGCAGCGGAGTTGGAGAAGGATTTGATTGTGAAAGAACTCGAAACACTTGACGTGCTTGAAGAACTGGGAGCTACCAAAAGGATTGTGGAGGATCTAAAGCAACAGCTACAAAAAGAAGCATTGAAATGCTTTGTAGCTCCATATGTCCATTCGCATGAACATGTTGGAACTCCTATTATTAAGGAGATGAATAAGGAAAATTGTGGAAAGAATCCAGGACATATATTGCAAAGTTCAAGTCCCTGCCCTATGTCAACGCCTGATCTGTTATTAATGGATATAAAACAAGCTAAATTAAATCTTGCAGTCTCTGCTCAAGAGCGGGCCCAAGAACTATCAAGATTAAATTCATCAGCAGCTCCTGTTGAAGCAACTAGCACTTTTAATAATCCCTTAAACATTATGAGAAGTTTCAATCCTGAAGCTGGGCAGCACAATAGAATGGTTGACACAAAAATTTATGATGCTTCAAAGCCCTTCCCTCCGAAAGAAGAGAATGGATTAAGCATTAAGACAGCTGAGATGAGGTTGTTTGCAGCTCACAAAATGGAAGAAGCCGCAAGGGCAGCAGAAGCCATTGCTCTTGCTGAAATTAAGGCTCTATCCAGCAATGAGAGACCATCAGGACTTGCACAACCAGAGATTCAGAAAGTAACTTTTGCTTTAAGGGAGCACTCTcctttaaaccccaaagctcAAATTCCTGAAGAGTCAACCTTGAAGAAAGTAATAGATTCCAAGTACCAAACTGATGAAACAAACATTTCTAAACTGACTATTCTTAGATGGTTGGAGGAAGCATCGGCAGATGTTCTCCATAGCAAAAAAGTATTGACAGAGGCTTTAAACAGAGTTGAATCCGCAAACAGCAAGCAACATGCTGCTGAAGAGGCTCTGCGGAGATGGCTTCCTGATGGTGAACTGAAGGGACAAGTATTGTACAACTCTATAAAGAGCAACAAGTTCAACCAGGCTGGAAATTATCACAACTCTCCTCTACCAGATGTAATGAGGTCAACAACAACGAACAATGATCCAAAGCCTGTTTTAAGGTCAACAGTTTCATTGAGAGATGTACTAAGCAGAAAGCAAGTTCCTGAAGAATATGGTACGAGAAAGGAGATGGATGATCATGCTGCAAGACAGAAGGTAGCATTGAGTCAAATGCTCCGCGCATTGAGGGAGGATCTAACAATTCCTACAGAAGCTGAGAAAGATCGGAGCCATCAAAAGCAGTACATGGGACAGAGGAAGAAGTTCGGATTCATCCAAATATCACTTCCCTTGACAaagcaaaataagaaaagggcATAA 1746 0.4278 MTTTFPTLFLNRKSRSKSREGHRHDELSFTCILLHGVLSLFALVAMDETRESAAQGVPGTPGIREVRSEPRSENLEPGARTGENPSLGIRMVNCRAEIDTSPPFGSVKEAVTRFGGSGPWLPLYKLGEAFNNIEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALKCFVAPYVHSHEHVGTPIIKEMNKENCGKNPGHILQSSSPCPMSTPDLLLMDIKQAKLNLAVSAQERAQELSRLNSSAAPVEATSTFNNPLNIMRSFNPEAGQHNRMVDTKIYDASKPFPPKEENGLSIKTAEMRLFAAHKMEEAARAAEAIALAEIKALSSNERPSGLAQPEIQKVTFALREHSPLNPKAQIPEESTLKKVIDSKYQTDETNISKLTILRWLEEASADVLHSKKVLTEALNRVESANSKQHAAEEALRRWLPDGELKGQVLYNSIKSNKFNQAGNYHNSPLPDVMRSTTTNNDPKPVLRSTVSLRDVLSRKQVPEEYGTRKEMDDHAARQKVALSQMLRALREDLTIPTEAEKDRSHQKQYMGQRKKFGFIQISLPLTKQNKKRA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2603 581 Coils Coil 131 158 - -
Sto9g2603 581 MobiDBLite consensus disorder prediction 469 492 - -
Sto9g2603 581 Pfam Weak chloroplast movement under blue light 313 447 IPR008545 -
Sto9g2603 581 Pfam Weak chloroplast movement under blue light 96 182 IPR008545 -
Sto9g2603 581 MobiDBLite consensus disorder prediction 51 86 - -
Sto9g2603 581 MobiDBLite consensus disorder prediction 1 21 - -
Sto9g2603 581 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 48 246 - -
Sto9g2603 581 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 247 580 - -
Sto9g2603 581 Coils Coil 422 442 - -
Sto9g2603 581 Coils Coil 163 183 - -
Sto9g2603 581 PANTHER WEB FAMILY PLANT PROTEIN 247 580 - -
Sto9g2603 581 PANTHER WEB FAMILY PLANT PROTEIN 48 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2603 Sto-Chr9 28445118 28447838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2603 - - gmx:100818214 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2603 9 28445118 28447838 Sto5g1452 5 9956291 9958174 ECH
Sto9g2603 9 28445118 28447838 Sto9g2603 9 28445118 28447838 ECH