Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1452 ATGGCCGAAACCCTCGAAGCCGCTTCCGTGGGGGTTCCCGGAACGCCTGCCATAAGGGAGCTCAGACCCGACACCGGATCCGCGAAGCCCGTTCCCGGAAACGGATCGGGTCGGAGGGTCAACCCGAGAGCTGAGATTGACACGTCGCCGCCGTTCGGATCAGTCAAAGAGGCCGTGACCCGTTTCGGAGGTAGCGGACATTGGCTTAACGGCATTGAAGATTTTGACATCAAGAAAGTGGAGGAACAAGCAGCAGAGTTGGAGAAGGATCTTATAGTGAAAGAGCTTGAAACACTTGATGTGCTTGAAGAACTTGGAGCTACTAAAAGGATAGTGGAGGAATTGAAGCAGCAGCTACAAAAGGAAGCACTGAAATGTTTTGTAACTCCAGAAGAAGTTCATTCCTGTGAACCTGTTGGGCCTCCTGTTATAATTAAGGAGATGAATAAGGAAAATCATGGAAATGTTGTGAACAACCAAGAACAGATATTGCATGGTTCAAGCCCCGGCTCTGCCTCATCATCACCTGATATGATCTTAATGGAGTTAAAACAGGCTAAAGTTAATCTTGGTAAAACTATCAATGAACTAGGGGTGATTCAATCTTCTGTTGAGTCTTTGAACAAGAAGATGAAGAATGAGAAGATTTTTCTTGAGAGGACACATGAGAAGCTAGCAGAAAAATATGCATCTGTCTCAGTTCATGAACAAATTAGACTAAATCCACCAGCAGCTCCTGTAGAAACAAGCAACAGTTTTGATGATCCCATGAATATTATGAGGAGTATCAATTCTGAAGATATTGGATTTGGAATTAAGATTGCGGAGATGAGGTGGTTCGCAGCTAAAAAGATGGAAGAAGCAGCAAAGGCAGCAGAAGCCATTGCTCTTGCTGAAATCAAGGCACTATCCAACACCGAGAAAGTGAGTACTTTTCCTTTAGGGGATCGTTTTCCTCTAACCCCAAAAGCTCAAATACTCCAAGAGTCAACCACAAACATGAGTATTCCCACAATGAGTGTTCTGAGAAGGATGGAGGAAGCAACAGAAGAAGTTAGACATAGCAAGCAAGTGTTGACTGAGGCTCTGAACAGAGTTGAAACTGCAAACAGAAAGCAACATGCTGCTGAGGAGGCTCTGAGGAGATGGATTCATGAGAATGATGATGTGAAGGGACAAGCAGTGTTTAACTCTATTAAATGCAACAATGATCCAAAGCCTGTTTTAAGGCCAACGGTTTCAATGAGAGATGTACTAAGCAGAAAGCAAGTTCCTGAAGAGTATGGGACAAGGAAAGACATGGACATGCATATGGAAGAGCATAGTGAAAGGCAGAAGGTAGCTTTGAGTCAAATGCTGCGTGCATTGAAGGAAGATCTAAGTATTCCTCCTGCAAAAGCTGAGAAAGATGGGAATGGGAGCGATCAGAAGCAGTTCGTAGCACAGAGGAAGAAGTTTGGGTTTATACAAATATCACTTCCCTTGGGAAGGCCAAGTAAGAAAAGGGCATGA 1512 0.4425 MAETLEAASVGVPGTPAIRELRPDTGSAKPVPGNGSGRRVNPRAEIDTSPPFGSVKEAVTRFGGSGHWLNGIEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEELKQQLQKEALKCFVTPEEVHSCEPVGPPVIIKEMNKENHGNVVNNQEQILHGSSPGSASSSPDMILMELKQAKVNLGKTINELGVIQSSVESLNKKMKNEKIFLERTHEKLAEKYASVSVHEQIRLNPPAAPVETSNSFDDPMNIMRSINSEDIGFGIKIAEMRWFAAKKMEEAAKAAEAIALAEIKALSNTEKVSTFPLGDRFPLTPKAQILQESTTNMSIPTMSVLRRMEEATEEVRHSKQVLTEALNRVETANRKQHAAEEALRRWIHENDDVKGQAVFNSIKCNNDPKPVLRPTVSMRDVLSRKQVPEEYGTRKDMDMHMEEHSERQKVALSQMLRALKEDLSIPPAKAEKDGNGSDQKQFVAQRKKFGFIQISLPLGRPSKKRA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1452 503 Coils Coil 77 97 - -
Sto5g1452 503 Coils Coil 208 228 - -
Sto5g1452 503 Coils Coil 345 379 - -
Sto5g1452 503 PANTHER WEB FAMILY PLANT PROTEIN 6 502 - -
Sto5g1452 503 MobiDBLite consensus disorder prediction 1 52 - -
Sto5g1452 503 Coils Coil 102 122 - -
Sto5g1452 503 MobiDBLite consensus disorder prediction 458 479 - -
Sto5g1452 503 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 6 502 - -
Sto5g1452 503 Pfam Weak chloroplast movement under blue light 44 121 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1452 Sto-Chr5 9956291 9958174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1452 - - gmx:100818214 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1452 5 9956291 9958174 Sto5g1452 5 9956291 9958174 CCT
Sto9g2603 9 28445118 28447838 Sto5g1452 5 9956291 9958174 ECH
Sto5g1452 5 9956291 9958174 Sto5g1452 5 9956291 9958174 ECH