Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2545 ATGTTGAATAGCCCACAAGATTGGCCCGAGCCCATAGTGCGCGTCCAGTCCCTATCCGAGACCTGTGTTGATTCCATCCCCGACACCTACATTAAGCCTCCTTCTCATAggccctcttcctcttcctctttcaCTACCACTAACATCCCAATCATCGACCTCTCCCCTCTATACGCTTCCGACCCCGAGGCTCGAGCCGCCACGCTCGCCCAAATCCTGGACGCTTGCAACGACTGGGGCTTCTTCCAAATCGTGAACCACGGGGTGAGCCATGCGCTGATGGACGCCGCTCGCGAGACATGGCGCGCCTTCTTTCACCTCCCCATGGACATCAAGCAAGCCTACGCCAATTCCCCCAAGACCTACGAGGGCTACGGAAGTAGGCTGGGAGTGGAGAAGGGCGCGATCCTCGATTGGAGCGACTACTACTACCTTCACTACCTCCCCTTGTgcttgaaggactacgacaagTGGCCTGCTCTACCTCCCTCTTGTAGGGACGTCTTCGATGAGTATGGGAGGGAGGTGGTCAAGCTGTGTGGGAGGTTGATGAAGGTGCTGTCCTTAAATCTGGGACTCCATGAGGGCTTCCTTCAGAATGCGTTTGGTGGGGAGGACATAGGGGCGTGCCTGAGGGTCAACTTTTACCCAAAGTGCCCCAAGCCGGAGTTGACGCTGGGTCTGTCGTCGCACTCCGACCCGGGAGGGATGACCCTACTGCTACCGGATGACCAGGTTCCCGGTCTACAAGTGAGAAAGTCCGGTGACTGGATTACGGTGAAGCCGCTTCCCCATGCCTTTATAGTCAATATCGGAGACCAAATTCAGGTTATAAGCAATGCAAGGTACAAGAGTGTGGAGCACAGAGTGATTGTAAATTCAGATAAAGAAAGAGTATCGCTTGCCTTCTTCTACAACCCAAAGAGTGATATACCCATACAACCAGCAAAGGAGCTTGTGACGCCACACACGCCTCCGCTTTACCCCGCCATGACCTTCGATCAATATAGGCTCTTCATTCGTTTGAAGGGACCTCGTGGGAAATCTCAAGTCGAATCTTTAACCACTACTACATCATGa 1080 0.5157 MLNSPQDWPEPIVRVQSLSETCVDSIPDTYIKPPSHRPSSSSSFTTTNIPIIDLSPLYASDPEARAATLAQILDACNDWGFFQIVNHGVSHALMDAARETWRAFFHLPMDIKQAYANSPKTYEGYGSRLGVEKGAILDWSDYYYLHYLPLCLKDYDKWPALPPSCRDVFDEYGREVVKLCGRLMKVLSLNLGLHEGFLQNAFGGEDIGACLRVNFYPKCPKPELTLGLSSHSDPGGMTLLLPDDQVPGLQVRKSGDWITVKPLPHAFIVNIGDQIQVISNARYKSVEHRVIVNSDKERVSLAFFYNPKSDIPIQPAKELVTPHTPPLYPAMTFDQYRLFIRLKGPRGKSQVESLTTTTS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2545 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 307 IPR005123 -
Sto9g2545 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 159 IPR026992 -
Sto9g2545 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 355 - -
Sto9g2545 359 SUPERFAMILY Clavaminate synthase-like 12 340 - -
Sto9g2545 359 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 9 355 - -
Sto9g2545 359 Gene3D - 10 340 IPR027443 -
Sto9g2545 359 Pfam 2OG-Fe(II) oxygenase superfamily 209 307 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2545 Sto-Chr9 28055216 28057234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2545 15 354 Glycosyltransferase AT5G59530 32.295 1.42e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2545 - - gmx:100794125 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2545 9 28055216 28057234 Sto5g1500 5 10374360 10377883 ECH
Sto9g2545 9 28055216 28057234 Sto9g2545 9 28055216 28057234 ECH