Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1500 atgAAAAATAGCCCACAAGAAGAGTGGCCTGAGCCAATCATCCGCGTTCAATCCTTATCCGAGGCCTGCGTCGATTCCATCCCGGACAGGTATATTAAACCCCCTACGGATAGGCCTTCTTTCTCCTCCTCACCCGACGACGACGACGTCGTTTCCAACATCCCCATCATCGACCTCCACCCTCTCTTCTCCGCCTCCGACCCGGCCGCCCGAGCCAGCGTCCTCGCCCAAATCTCGGACGCGTGCCGCGATTGGGGGTTCTTCCAAATCGTGAACCACGGCGTGAGCCCGGAGCTCATGGACAaggctagggacacgtggcgcCAGTTCTTCCACCTCCCCGTGGAAATGAAGCAGCAATACGCCAACTCGCCCAAGACCTACGAGGGATACGGAAGCAGATTGGGAGTCCAGAAAGGCGCTATTCTCGACTGGAGCGACTATTACTTCCTCCACTACCTCCCTCTCCAGCTCAAGGACCACAATAAATGGCCCTCTCACCCTCCCTATTCCCGGGAGGTGGTGGAGGAGTATGGGAGGGAGGTGGTGAAGCTGTGCGGGAGGGTGATGAAGGTATTGTCAGTGAATTTAGGGTTGGAGGAAGATCGGCTTGAGAATGGGTTTGGGGGGGAAGAGGTAGGGGCGTGTTTGAGGGTGAATTTCTACCCGAAATGCCCTCGGCCGGAGCTGACGTTGGGGCTTTCGTCGCACTCCGACCCGGGAGGGATGACGATGCTGTTACCGGACTCGGAGGTAGCGGGTCTCCAAGTGCGGAGGTTGGATACGTGGATAACCGTCAAGCCCGCACGCCATGCGTTTATTGTGAATATCGGCGACCAATTACAGGTTCTAAGCAATGCAATATACAAGAGTGTGGAGCACAGAGTGATTGTAAATTCAAATCAAGAAAGAGTTTCTCTTGCCTTCTTCTACAACCCCAAGAGCAACATACCGATCGAGCCCGTGAAGGAGCTCGTCACGCCGGACCGGCCGGCCCTCTACCCTCCGATGACCTTCGATGAATACCGGCTCTTCATTAGATTGAAAGGACCTCAAGGAAAATCTCAAGTTGAGTCTTTAAAATCACCAAGgtaa 1095 0.5342 MKNSPQEEWPEPIIRVQSLSEACVDSIPDRYIKPPTDRPSFSSSPDDDDVVSNIPIIDLHPLFSASDPAARASVLAQISDACRDWGFFQIVNHGVSPELMDKARDTWRQFFHLPVEMKQQYANSPKTYEGYGSRLGVQKGAILDWSDYYFLHYLPLQLKDHNKWPSHPPYSREVVEEYGREVVKLCGRVMKVLSVNLGLEEDRLENGFGGEEVGACLRVNFYPKCPRPELTLGLSSHSDPGGMTMLLPDSEVAGLQVRRLDTWITVKPARHAFIVNIGDQLQVLSNAIYKSVEHRVIVNSNQERVSLAFFYNPKSNIPIEPVKELVTPDRPALYPPMTFDEYRLFIRLKGPQGKSQVESLKSPR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1500 364 SUPERFAMILY Clavaminate synthase-like 13 347 - -
Sto5g1500 364 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 212 313 IPR005123 -
Sto5g1500 364 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 10 361 - -
Sto5g1500 364 MobiDBLite consensus disorder prediction 28 49 - -
Sto5g1500 364 PRINTS Isopenicillin N synthase signature 78 95 - -
Sto5g1500 364 PRINTS Isopenicillin N synthase signature 273 299 - -
Sto5g1500 364 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 361 - -
Sto5g1500 364 Pfam 2OG-Fe(II) oxygenase superfamily 215 313 IPR044861 -
Sto5g1500 364 Gene3D - 12 346 IPR027443 -
Sto5g1500 364 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 167 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1500 Sto-Chr5 10374360 10377883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1500 16 361 Glycosyltransferase AT5G59530 31.389 2.30e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1500 - - gmx:100814471 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2545 9 28055216 28057234 Sto5g1500 5 10374360 10377883 ECH
Sto5g1500 5 10374360 10377883 Sto5g1500 5 10374360 10377883 ECH