Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2398 ATGGGTCTAAGTGTCTCTCCAAATCCCAAGTGTTGGCAGAGCTCACTTCTCTCGTCCCCGAAGCCACCTGCTTCGGTtcattcatcttcttcacttagAAATCTAACTCATATTGCTAAGACTACTACTCTGCCTTATCCTCTGTTTCATCGGTCCCCCTCGCGCGGCTTCAAGAATTTCAGAACGCAGAGAGTAACTCGAGTTCGTTCTGCAGATTCTGATGATTTATTTGATGAAGAAATGATGAATCTGATTAAGGAAGTGGCAAGGGCATTCGATCAATCCGAGGACGAGGATGTAAAATCCTATGTCCCCCTCCCCGAGGATACCCAAAACAGAGAAGTCAAAACATTATCCTCCTCGGAGAAATTTTTAACAATGAAGCCTGATCTTCTAGAACCTTCTCAGCTGGGTATTGAGCCTGAGCCACCCAGCTGGCCGGagagagatgaattgttgaAACTGAGAATTGCGAGGAAATTGAACGGTGTGGGACTTCCTCTGTCGATTCGGATGATCAAGAAGAAGCTTCAATGGCAAAAGGGTCTCCAAGAAGCAAGCGATTTCACTTACTGTTCAGTGAAAAAGACGTTTTCCTCTATGTTGTTCATCATCCACGAGATTCAACACTATGCCCTGCAAGTAAGTGAGACTCTGTACTATGAAGATTTACGAGATGCTATGAACAAGGTCCGTACAGACGTGGATGCCTCCTTCGTGTGGCTATTCCAGAAGGTTTTCTGGAAATCCCCAAGTCTCATGCTTTATATGATGGTCCTCCTAGCCAACTTTTCTGTGTACTCAATGGGTAATCACACTGTAGTTTCTGTCACTCCTAGTTCTGTGATAACGGAGGTTCAAAATGTGAGTGAGAGCAAGAATAATAAGAAGGGGttgaaagaggaagaagaggcaTTGTGGAATTCCATTATACAGGAAGCTTCGAGGCTGCATGATGGGAAAAGGAGTGAGGATTTGGAAAAGGAGACAATGAAACAATTTGTGTCCCCTGAGTCTGTGGAGATTGAAGAGGACAAGTACGAGGAATATGCAAGTACAGATTTTTATTACAAGAAGTATTTGTTTGGGGACCCCAACAATTCCCTTCTGCTCTCTAACTATGCCATGTTCCTTTACCTTGTTGTTCGTGACAATGATCTGGCAGAAAAGTACTTCAGGCAATCGGTGTCGGTGAAGCCAGCAGACCCAGAGGCCTTCAGTCGATATGGTGATTTCTTATGGTTGGCGAAGAATGATTTGTGGGGAGCAGAAACGAGATATCTGCAAGCAATTGAAGAAGATAAAGGAAACCCGCATCACACTTCAAAGTACGCCAGTTTCCTATGGAACACTGGTGGAGATGATACTTGCTATCCTATATATTACAGGGACGACACAGAACAACAATGA 1410 0.4255 MGLSVSPNPKCWQSSLLSSPKPPASVHSSSSLRNLTHIAKTTTLPYPLFHRSPSRGFKNFRTQRVTRVRSADSDDLFDEEMMNLIKEVARAFDQSEDEDVKSYVPLPEDTQNREVKTLSSSEKFLTMKPDLLEPSQLGIEPEPPSWPERDELLKLRIARKLNGVGLPLSIRMIKKKLQWQKGLQEASDFTYCSVKKTFSSMLFIIHEIQHYALQVSETLYYEDLRDAMNKVRTDVDASFVWLFQKVFWKSPSLMLYMMVLLANFSVYSMGNHTVVSVTPSSVITEVQNVSESKNNKKGLKEEEEALWNSIIQEASRLHDGKRSEDLEKETMKQFVSPESVEIEEDKYEEYASTDFYYKKYLFGDPNNSLLLSNYAMFLYLVVRDNDLAEKYFRQSVSVKPADPEAFSRYGDFLWLAKNDLWGAETRYLQAIEEDKGNPHHTSKYASFLWNTGGDDTCYPIYYRDDTEQQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2398 469 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 13 460 - -
Sto9g2398 469 MobiDBLite consensus disorder prediction 1 30 - -
Sto9g2398 469 Gene3D Tetratricopeptide repeat domain 342 451 IPR011990 GO:0005515
Sto9g2398 469 SUPERFAMILY TPR-like 350 460 IPR011990 GO:0005515
Sto9g2398 469 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 13 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2398 Sto-Chr9 27111820 27113517 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2398 - - gmx:100775399 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2398 9 27111820 27113517 Sto5g1539 5 10673280 10683710 ECH
Sto9g2398 9 27111820 27113517 Sto9g2398 9 27111820 27113517 ECH