Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1539 ATGGTCGATTTAGATTGGAAATCAAAGAACATGATGAGCTCCGATAATATGCCTTCAAAACCACGTGTCTCCCTCCTTCCCACTCCTCCTCCTCTAACGGCGCCGTTTCACCCCACTGATATCTCACCCTCGTCTTCTCCATCTTGCTCTGCCTACGAACACTACCTTCGTCTCCCTCACCTCAGGAAGCTATGGAACTCCAACGACTTCCCCAATTGGAAGAGCGAATCCATCTTCAAACCTTCCTTCCACGCGCTCGAGCTCACCTTCCGCTTCCTCTCCACCGTCCTCTTGGATCCCCGACCCTACGCCAACCGCCGCCAATGGCTCCGCCGTGTCGAGTCCCTCGCCGTCGCCGAGGTCGAGATCATCGCCGTCCTCTTCGAGGACGATGAAGATGATCCGACCACGCGCGGCACCGCTCCGACGACTGACATCGGCGAGAGCGTCGAGAGGAGTTACAGTGAGGCCAGCTTGCTTCCGCGATTGGCCACATGGTACAGATCTAAGGACGCAGCGCAGAGGATCCTCTGCTCCGTGGAAACGCAAATGAGCAGGTGTCCCTACACGTTAGGTCTCGGCGAAGcgaatctcgccggaaaaccGATTCTCCGGTACGACGCCGTGTGCAAGCCGAGCGAGATCCACAATTCGCTGAACAGAGCACCGAACGACGACCACGTGGAGAATCACGAGAACCAAACAGTGTACACCACGCACCAGATCGTGGAGTCGTGGATCCGCGTCGCGCACAAGCTGCTCGACAGAATCACCGAGAGAATCGGAAGCAAGAGGTTCGACGAGGCGGCGCGCGACTGCTACATCGTGGAGCGGATCTGGAAACTGCTGGCGGAGATCGAAGATCTGCATCTTCTGATGGATCCGGACGACTTCCTGCGGCTGAAGAAGGATCTGGCGATGAAATCAGCGACTGATACGACGGCGTTCTGCTTCCGATCGAGGGAGCTAGTGGAGGTGACGAAGGAGTGTAGGGATCTGAAGCAGAAGGGGATAGAAGGAGCGATGAAGAGATTCTTCTATGCGTACAAGcaggtgttggtggtggtgatgggaaGCTTGGAGGCGAGTGGGAACCGAGTCGACTCCGGGGGTGACTCGCTGAGTCGGATATTCTTGGAGCCCACGTATTTTCCGAGTTTGGATGCTGCAAAAACGTTTCTGGCGTATTTCTGGGAGAGTGAACACGCTGCTAGTGTTAGAGGGCTACGAGCTGGAAATCGCAATTCCTCTGAAAATATGGGTTTGGCGTTGTATCAGAATCCCAAGTGTTTGCAGAGTTCATTGCTTCTAGCCCCTCATTCTCTGTGTCATCCCCACAAGAAGCCACCTTCTGCAATTCCTTCTCTTTCACTGAGAAATCTCAGTGATGGCATCAGCAACCATGCGCCATTTCGCTTGATTCATCGATCTTCTTCGTATAATGGCTTCATGGGTTCGAGAGTGCAGAGACTAAAGCCTGCTTGCACTGCTTATTCTGGGGAATGTTTCGATGAGGAAACGATGAATCAAAGCAAGCAATACGAGCAAGATGACGAGAGTGACAACGTCATAGATATAATTTACCAAGTCTCTGAGATTGAGAATACCCAGAACAACACAGAAGTGATTAATAGCTCAGAAAAGAGTTCAAAGGAGCAATTTTGGATGATGACAAAGCCTGAAGTTTTGGACCCTTCTGAGTTGGGTATTAAGCCTGAGCCACCGAGCTGGCCAGAAAGAGAGAAAATCCTGAGACTGGAGTTCGAAAAGAAAGTGAATTGTTTGGGAATTCCTTTCTCCATTCGAATAATCCAGAAGAAGCTACAATGGCAGAAGAATTTCACAGAAGCAAGAGAGTTCATCACCTGCTGTTCCATGAAGAAGAGCTTCTCCTCCATGATGTTCATCATCCACGAGCTCCAGAATTACACCCTTCAGATCAGACAAAACCTGCACTGTGAGGACAACATGCAGGGTCTCATAACGAAATTCCGAAGCGACGTGGACGCCTCCTGCGTCTGGCTCTTCCAGAAGATTCTGTGCAAGACACCAAATCTCATGGTCTACACCATGGTCCTGCTGGCAAACTTCACTGTGTTCTCCATGAAAAACAACACGGTTCTTGCAACCACTGCTCCGTTGATCACGGAGGCTCGAATAATGATGTTGGCCGACAAGAAGGAGCAAGACGAGGATGAGAAGTTGTGGATGAAGATTGTGGAGGAAGCTTACAGGATGCAAGAGGAACTGAGGAGTGAGGCTTTGGACAGAGAGACAGTGAAACAGCTTGTGGCACCAGTGAGTGTGGAGCTTGAAGGAGATACGTACGAGGAATATGAAAGAACAGAGATGTGTTACAGAGAGATTATAAATTTGGCACCAAATAACTCACTTCTGCTATCAAACTATGCTCAGTTCCGCTACCTTGTCTACGGCGACGTTGATGAGGCAGAGGAATACTTCAGGAGCTCAATGAGGGAGAATCCAGAAGATCCAGAAACATTGAGTAGATATGCAGACTTCCTATGGTTGGTAAGAAAGGATGTAGGAGAAGCAGAAGAGAAATACCTGGAAGCAATGGATGCAGCACCTGGCAACACTCATTATATGACCAAGTATGCCCATTTCATTTGGTACACAGGTGGCCAAGGAACTTGCTTTCCCACCTTGGAAAATCGCCGCAACTTCGGCCCCGTCGCTTAA 2703 0.495 MVDLDWKSKNMMSSDNMPSKPRVSLLPTPPPLTAPFHPTDISPSSSPSCSAYEHYLRLPHLRKLWNSNDFPNWKSESIFKPSFHALELTFRFLSTVLLDPRPYANRRQWLRRVESLAVAEVEIIAVLFEDDEDDPTTRGTAPTTDIGESVERSYSEASLLPRLATWYRSKDAAQRILCSVETQMSRCPYTLGLGEANLAGKPILRYDAVCKPSEIHNSLNRAPNDDHVENHENQTVYTTHQIVESWIRVAHKLLDRITERIGSKRFDEAARDCYIVERIWKLLAEIEDLHLLMDPDDFLRLKKDLAMKSATDTTAFCFRSRELVEVTKECRDLKQKGIEGAMKRFFYAYKQVLVVVMGSLEASGNRVDSGGDSLSRIFLEPTYFPSLDAAKTFLAYFWESEHAASVRGLRAGNRNSSENMGLALYQNPKCLQSSLLLAPHSLCHPHKKPPSAIPSLSLRNLSDGISNHAPFRLIHRSSSYNGFMGSRVQRLKPACTAYSGECFDEETMNQSKQYEQDDESDNVIDIIYQVSEIENTQNNTEVINSSEKSSKEQFWMMTKPEVLDPSELGIKPEPPSWPEREKILRLEFEKKVNCLGIPFSIRIIQKKLQWQKNFTEAREFITCCSMKKSFSSMMFIIHELQNYTLQIRQNLHCEDNMQGLITKFRSDVDASCVWLFQKILCKTPNLMVYTMVLLANFTVFSMKNNTVLATTAPLITEARIMMLADKKEQDEDEKLWMKIVEEAYRMQEELRSEALDRETVKQLVAPVSVELEGDTYEEYERTEMCYREIINLAPNNSLLLSNYAQFRYLVYGDVDEAEEYFRSSMRENPEDPETLSRYADFLWLVRKDVGEAEEKYLEAMDAAPGNTHYMTKYAHFIWYTGGQGTCFPTLENRRNFGPVA 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1539 900 SUPERFAMILY TPR-like 777 884 IPR011990 GO:0005515
Sto5g1539 900 Gene3D Tetratricopeptide repeat domain 744 881 IPR011990 GO:0005515
Sto5g1539 900 Pfam Hs1pro-1 protein C-terminus 337 399 IPR009743 -
Sto5g1539 900 Pfam Hs1pro-1 protein C-terminus 184 336 IPR009743 -
Sto5g1539 900 Pfam Hs1pro-1 N-terminus 1 181 IPR009869 GO:0006952
Sto5g1539 900 MobiDBLite consensus disorder prediction 1 28 - -
Sto5g1539 900 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 225 394 IPR037217 GO:0019441|GO:0020037|GO:0046872
Sto5g1539 900 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 336 IPR038759 -
Sto5g1539 900 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 337 405 IPR038759 -
Sto5g1539 900 Gene3D - 205 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1539 Sto-Chr5 10673280 10683710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1539 - - gmx:547603 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2398 9 27111820 27113517 Sto5g1539 5 10673280 10683710 ECH
Sto5g1539 5 10673280 10683710 Sto5g1539 5 10673280 10683710 ECH