Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2392 ATGTTACCCCAGAAACAAGCCGAAGAAGCCATGATGTCAAGCCTGAATCAGACGATTGAGCGTGATGACAGAGAGGAAGAGAAGGAGGATACTTCAGTTTTCAGCCTGAAAAGTTTTCTCTGGCATGGAGGGTCTGTTTATGATGCCTGGTTCAGCTGTGCCTCAAATCAGGTAGCCCAGGTTCTGTTAACTCTGCCATACTCTTTCTCTCAACTTGGAATGCTTTCAGGCATCATATTTCAAGTCTTCTATGGTCTGCTTGGAAGCTGGACTGCTTATTTAATTAGCATCCTGTACATCGAGTACAGAAGCCGAAAAGAGAAGGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGATGGATTATTGGGTCCATACTGGAAAGCAATTGGGTTGGCCTTCAACTGTACTTTTCTCCTCTTCGGATCTGTCATCCAGCTTATAGCTTGTGCcagTAATATATACTACATAAATGACAGATTGGACAAGAGGACTTGGACTTACATATTTGGCGCATGTTGTGCCACCACGGTGTTCATACCCTCTTTTCACAATTACAGAATTTGGTCCTTCCTTGGCCTTGGCATGACCACCTACACAGCTTGGTATTTGACCATCGCATCTCTCCTTCATGGCCAGGTTGAAAACGTGACGCACTCGGGCCCGACCAAGTTAGTTTTGTATTTCACAGGCGCCACCAACATTCTCTACACTTTCGGCGGACACGCCGTTACAGTGGAAATTATGCATGCGATGTGGAAGCCTCAGAAATTCAAATACGTGTATCTGATTGCGACTGTGTATGTGTTCACCCTGACCCTCCCGTCTGCCAGTGCCGTCTACTGGGCCTTCGGTGATCAACTTCTGGACCACTCCAACGCCTTCTCCCTCCTGCCTCACTCCCCATGGCGTGACGCCGGTGTCATTCTCATGCTCATCCACCAGTTCATCACATTCGGCTTCGCTTCTACTCCCTTGTACTTCGTCTGGGAGAAAGTCATAGGAATGCACGACACCAAGAGCCTATGCCTACGAGCCCTCGCTCGCTTACCTGTCGTCATTCCCATCTGGTTTCTCGCCATTATTTTCCCTTTCTTTGGCCCCATTAATTCCGCCGTAGGGGCTCTCCTCGTTAGCTTCACCGTCTACATCATCCCTGCCATGGCCCATATGCTCACTTACAGGTCTCCCTCCGCACGCCAGAATGCCGCAGAGAAACTGCCTGTGTTCATCCCGAACTGGACGGTGATGTACGTGGTGAATGCATTCGTGGTGGTGTGGGTTTTGGTGGTGGGCTTTGGGTTCGGAGGGTGGGCCAGCATGACCAATTTCATCAAGCAGGTTGATACCTTCGGCCTATTTGCCAAGTGCTACCAGTGCCCCCCTAAACTCCCTCCCTCACCTTCAAACCACACAGCTCACCACTGA 1443 0.4934 MLPQKQAEEAMMSSLNQTIERDDREEEKEDTSVFSLKSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQVFYGLLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASLLHGQVENVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYVYLIATVYVFTLTLPSASAVYWAFGDQLLDHSNAFSLLPHSPWRDAGVILMLIHQFITFGFASTPLYFVWEKVIGMHDTKSLCLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPAMAHMLTYRSPSARQNAAEKLPVFIPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKLPPSPSNHTAHH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2392 480 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Sto9g2392 480 PANTHER AUXIN INFLUX TRANSPORTER 2 468 - -
Sto9g2392 480 PANTHER OS05G0424000 PROTEIN-RELATED 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2392 Sto-Chr9 27087894 27089920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2392 17 465 Organic Solute Cotransporters AT2G21050 79.029 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2392 K13946 - gmx:100795466 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2392 9 27087894 27089920 Sto5g1536 5 10643870 10648170 ECH
Sto9g2392 9 27087894 27089920 Sto9g2392 9 27087894 27089920 ECH