Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1536 ATGTTGCCTCAGAAACAAGCGGAGGAAGCCATCGTGCCCACCACCACGACGACTGAGCGTGACGAGAGGGAGGTCGGGGATGGTTTTAGTCTCAAGAGCTTTCTCTGGCATGGCGGCTCTGTGTACGATGCGTGGTTCAGCTGCGCCTCGAACCAGGTGGCGCAAGTTCTGTTGACTCTGCCGTATTCGTTCTCTCAGCTGGGGATGGTTTCGGGAATCATATTCCAAGTGTTCTATGGGCTGCTTGGGAGCTGGACTGCTTATTTAATAAGCATACTGTACATCGAGTACAGGAGCcgtaaagagaaagagaatgtcAATTTCAAGAACCACGTCATTCAGTGGTTCGAAGTGTTGGATGGCTTACTGGGTCCATACTGGAAAGCTCTGGGTTTAGCCTTTAACTGTACTTTTCTCCTCCTCGGTTCTGTTATTCAGCTTATCGCTTGTGCAAgTAACATATACTACATAAATGATAAATTGGACAAGAGGACATGGACTTACATATTTGGAGCATGCTGTGCCACCACAGTGTTCATACCCTCATTCCACAACTACCGAATATGGTCCTTCCTTGGCCTTGGTATGACCACTTACACTGCTTGGTATTTGACCATCGCTGCCCTCGTTCATGGCCAAGTTGAAAATGTGAAGCACTCGGGCCCAAACAAGATGGTTTTGTATTTCACAGGAGCCACTAATATACTCTACACTTTCGGTGGCCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAATTCAAATACATATATCTTATAGCTACTCTCTATGTGTTCACCCTCACGCTGCCATCTGCATCCGCCGTCTACTGGGCCTTCGGCGACCAGCTGCTCGACCACTCCAACGCCTTCTCGCTCCTTCCTCGCAACGCCTGGCGTGACACCGGTGTCATTCTCATGCTCATTCATCAGTTCATAACATTTGGGTTTGCTTGCACACCATTGTATTTCGTGTGGGAGAAAGTGATAGGGATGCATGACACAAAGAGCATATGTTTGAGGGCATTGGCGAGACTGCCTGTGGTGATACCAATATGGTTCTTGGCCATTATTTTCCCATTCTTTGGACCCATTAACTCTGCTGTGGGGGCTCTTCTGGTCAGCTTCACCGTCTACATCATACCCTCTTTGGCCCATATGCTCACTTTCAGGTCTGCTTCCGCACGACAGAAAGCAGCAGAAAAACTTCCCTTCTTCATCCCAAACTGGACAGTGATGTATTCGGTGAATGCATTTGTGATAGTGTGGGTTCTGGTGataggttttggatttggaggATGGGCTAGCATGAGCAATTTCATCAAGCAAGTTGATACATTTGGACTTTTTGCCAAGTGCTATCAGTGCCCTCCTAAACTCTCTCCCTCTGCTTCCAATCACACATCACATCACTGA 1428 0.4671 MLPQKQAEEAIVPTTTTTERDEREVGDGFSLKSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIIFQVFYGLLGSWTAYLISILYIEYRSRKEKENVNFKNHVIQWFEVLDGLLGPYWKALGLAFNCTFLLLGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGQVENVKHSGPNKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLIATLYVFTLTLPSASAVYWAFGDQLLDHSNAFSLLPRNAWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTFRSASARQKAAEKLPFFIPNWTVMYSVNAFVIVWVLVIGFGFGGWASMSNFIKQVDTFGLFAKCYQCPPKLSPSASNHTSHH 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1536 475 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Sto5g1536 475 PANTHER AUXIN INFLUX TRANSPORTER 2 463 - -
Sto5g1536 475 PANTHER OS05G0424000 PROTEIN-RELATED 2 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1536 Sto-Chr5 10643870 10648170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1536 4 460 Organic Solute Cotransporters AT2G21050 78.337 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1536 K13946 - gmx:100795466 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1536 5 10643870 10648170 Sto5g1536 5 10643870 10648170 CCT
Sto9g2392 9 27087894 27089920 Sto5g1536 5 10643870 10648170 ECH
Sto5g1536 5 10643870 10648170 Sto5g1536 5 10643870 10648170 ECH