Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2162 ATGGGCAGCTATAGAGTGTGCGTGTGCTTCCAGCGCCGCTTCAAGGTGGCCGAGGCGGTGCCGCCGCTCGAAGTCAAAGAGTTCTTCAACAAATACGCCGACGGTGGGACCCACATGACACCCGAGCAGCTCCACCGCTTCCTCCTCGAGGTTCAAGGCCAGAGCGGCGATGACCTCGACGCCTCTCGCCGTATAGTGGAGCAGGTGTTGCACAAGCGCCACCACATTACTAAATTCGTCAGGCACACTCTTACGCTCGATGACTTCCATCACTATCTCTTCTCTCCCGACCTTAATCCTCCCATCGGATCTCAGGTTCACCAGGATATGACAGCTCCATTGTCACAGTATTTCATATATACTGGCCATAACTCCTATCTTACGGGCAATCAACTCAGCAGTGATTGTAGTGATGTGCCTATTATAAAGGCTTTAAATAGAGGTGTAAGAGTTGTGGAGCTTGATATATGGCCCAATTCCACGAAAGACGATGTGCATGTTTTACATGGAAGGACATTGACAACCCCTGTGGAGTTCATTAAATGTTTAAAATCCATTAAAGAACATGCTTTCACTGCATCTCCTTACCCCGTTGTAATAACTCTAGAAGACCATCTTACTCCAGACCTTCAAGATAAAGCGGCTCAGATGCTTACACAAACATTTGGAGATATGCTGTTTTGCCCGGGATGTGAAAATTTGAAAGTATTTCCTTCACCTGAAGAATTGAAGTATCGGATCTTAATATCAACAAAGCCCCCAAAAGAGTACCTCAGAGCTGACAGTGTCCAGATAAATATGAAAACATCACAGAAGTCGGTGGATTTTGATGAAGATGAAAGCACGAAGGAGCCTTCCGTCACAAAAGCTCAAGATGAAGATGATATTCCTGATATGATTGAACAgagtgaagatgatgatgagtcAAATGATGGTAGTGCCTCAGGATTGAACTCATCTTCCGCGTCAAACTATAAGCGTCTAATTGCAATTCATGCTGGAAAGCCCAAAGGCAGTTTGAAGGAAGCATTAAAAGTTGAGGCTGATATAATTAGACGCCTCAGTTTAAGTGAACAAGCGCTTGAAAAGGCTACTGTGTCACATGGAACTGATGTTGTAAGAGTTCTTCTATGTTCTGATTTAAGGCTTTTTGATTTTGTTAATAGATTCACCCAGAAGAATTACTTGAGGGTGTACCCAAAAGGTACACGGTTTAACTCCTCCAACTACAAGCCACTGATTGGCTGGATGCATGGTGCTCAAATGGTTGCCTTTAATATGCAGGGATATGGCAAATATCTTTGGTTGATGCATGGAATGTTTAGATCCAATGGAGGATGTGGTTATGTCAAAAAGCCAGATTTTCTTATGAATGAGGGTCCAGATAATGAGATATTTAATCCTAAAGCGGATATGCCAGTGAAGAAGACTCTGAAGGTGAAAGTCTATGTGGGAGACGGATGGCGTATGGACTTTAAACAAACTCACTTTGACCTATATTCTCCGCCAGATTTCTATGTCAGGATTGGCATAGCTGGAGTGTCAGCCGATGAGGTAATGAAGAAAACGAAGATAAAAGAGGATAACTGGATACCTGATTGGGAAGAAGACTTCAGCTTCCCATTGAGGGTTCCTGAACTTGCTTTGCTCAGAGTGGAAGTTAATGAATATGACACACATGAGAAGGATGATTTTGCAGGCCAAACATGTTTACCAGTCTCAGAACTGAAGCAAGGGATCAGAGCAGTCCCCCTCTACGACCGCAAAGGGGAGAAGTACAACTCGGTCCGGTTGCTTATGCGATTTGAGTTGATCTAA 1818 0.4351 MGSYRVCVCFQRRFKVAEAVPPLEVKEFFNKYADGGTHMTPEQLHRFLLEVQGQSGDDLDASRRIVEQVLHKRHHITKFVRHTLTLDDFHHYLFSPDLNPPIGSQVHQDMTAPLSQYFIYTGHNSYLTGNQLSSDCSDVPIIKALNRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVEFIKCLKSIKEHAFTASPYPVVITLEDHLTPDLQDKAAQMLTQTFGDMLFCPGCENLKVFPSPEELKYRILISTKPPKEYLRADSVQINMKTSQKSVDFDEDESTKEPSVTKAQDEDDIPDMIEQSEDDDESNDGSASGLNSSSASNYKRLIAIHAGKPKGSLKEALKVEADIIRRLSLSEQALEKATVSHGTDVVRVLLCSDLRLFDFVNRFTQKNYLRVYPKGTRFNSSNYKPLIGWMHGAQMVAFNMQGYGKYLWLMHGMFRSNGGCGYVKKPDFLMNEGPDNEIFNPKADMPVKKTLKVKVYVGDGWRMDFKQTHFDLYSPPDFYVRIGIAGVSADEVMKKTKIKEDNWIPDWEEDFSFPLRVPELALLRVEVNEYDTHEKDDFAGQTCLPVSELKQGIRAVPLYDRKGEKYNSVRLLMRFELI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2162 605 SUPERFAMILY PLC-like phosphodiesterases 108 458 IPR017946 GO:0006629|GO:0008081
Sto9g2162 605 Pfam Phosphoinositide-specific phospholipase C, efhand-like 24 98 IPR015359 -
Sto9g2162 605 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 387 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Sto9g2162 605 CDD C2_PLC_like 475 603 - -
Sto9g2162 605 SUPERFAMILY EF-hand 9 110 IPR011992 -
Sto9g2162 605 SMART plcx_3 108 252 IPR000909 -
Sto9g2162 605 MobiDBLite consensus disorder prediction 272 296 - -
Sto9g2162 605 Pfam C2 domain 477 579 IPR000008 -
Sto9g2162 605 SMART plcy_3 325 457 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Sto9g2162 605 Pfam Phosphatidylinositol-specific phospholipase C, X domain 110 252 IPR000909 -
Sto9g2162 605 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 477 604 IPR035892 -
Sto9g2162 605 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 605 - -
Sto9g2162 605 CDD PI-PLCc_plant 107 444 - -
Sto9g2162 605 Gene3D C2 domain 471 605 IPR035892 -
Sto9g2162 605 SMART C2_3c 477 585 IPR000008 -
Sto9g2162 605 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 389 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Sto9g2162 605 Gene3D - 20 101 - -
Sto9g2162 605 Gene3D Phosphatidylinositol (PI) phosphodiesterase 105 470 IPR017946 GO:0006629|GO:0008081
Sto9g2162 605 ProSiteProfiles C2 domain profile. 460 587 IPR000008 -
Sto9g2162 605 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 108 252 - -
Sto9g2162 605 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 605 IPR001192 GO:0035556
Sto9g2162 605 MobiDBLite consensus disorder prediction 297 311 - -
Sto9g2162 605 PRINTS Phospholipase C signature 113 131 IPR001192 GO:0035556
Sto9g2162 605 PRINTS Phospholipase C signature 139 159 IPR001192 GO:0035556
Sto9g2162 605 PRINTS Phospholipase C signature 236 253 IPR001192 GO:0035556
Sto9g2162 605 PRINTS Phospholipase C signature 395 416 IPR001192 GO:0035556
Sto9g2162 605 PRINTS Phospholipase C signature 416 434 IPR001192 GO:0035556
Sto9g2162 605 PRINTS Phospholipase C signature 571 581 IPR001192 GO:0035556
Sto9g2162 605 MobiDBLite consensus disorder prediction 269 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2162 Sto-Chr9 25322762 25326223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2162 1 605 Acyl Lipid Metabolism Gene Families AT5G58700 61.020 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2162 K05857 - tcc:18590491 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2162 9 25322762 25326223 Sto9g2162 9 25322762 25326223 ECH
Sto9g2162 9 25322762 25326223 Sto5g1511 5 10474917 10478567 ECH