Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1511 ATGCCACTCATTCCCAACGATTCTGCTTTAAAGAGTGAGAATCAGGGgccagaggaagaagaagggtttggTTATGACATGAAGACCTATAACAAGTACAAGTGGTTCCTTTTCTTCACTAGAAAGTACAAGATCAACGATCTTGTTCCACCTCTGGACCTCAAGGAGGCATTCTCCGAGTTCGCCGGCGGCGAGACCCGATTGTCCGGCGAACAGCTCCGGCGGTTTCTGGTGGAGCTCCAGGGCCATGAGGACTGCACCTTGTCGGAATCGGAGCAAATTATCGACAAGATTCTGAAACTGAGAAGTCGGAATCACGAAACTTCTGGTGGTGGTGATCATCATCAACATGGGCTCACCCTTGAAGATGTCTTCTATTTTCTGCTTTTTGATGATTTCAACAGTCCTTTGAAAGCTGAAgtgagctctctctctctctcttctctctctttctgtgTGTTTGGGCACAATTCATATCTCACTGGGAATCAATTGAGCAGTGATTGCAGTGATGAACCAATCATAAAGGCTTTACAACGAGGCGTGAGAGCTATTGAACTAGATTTATGGCCTACTCCTAATAAAGATGACATTAAAGTTGTTCATGGATGGACTCTTACCAATCCTGTTTCACCCATCAAATGTCTTGAAGCCATCAAGAAGAATGCGTTTGTTACATCTCAATACCCAGTCATTGTAactatagaagatcaccttacACCAGATCTTCAATCTAAATTCGCAGAGAATGGAAGTGACAAAGATAAGGAAAGTATAAATGCATGTGATCACAAGTCAGATCAGCAATGTCCACCTGATTACAAAGGTTTAATTACAATCCATGCAAAGAAACTCAAGGGTAGCTTAAAGGATAAATTGAGGATTGATGATGAAGTTAGACGCCTAAGTTGGAATGAGCAGACACTTGAAAAGGCTTCTGAATCTCATGGAACTGACATTGTTAGGTTCACACAGAAAAATATCCTCAGGGTATACCCAAGAGGAACACGTGTGCAGTCTTCAAATTTCAAACCACATATTGGGTGGATGTATGGGGCTCAGATGGTTGCATTCAATATGCAGAGGCACGACAAGCAGCTCTGGTTAATGCAGGGAATGTTCAGGGCAAATGGAGGGTGTGGTTATGTGAAGAAACCTCAAATTGTAATGCAGAAACTTCAAAATGACGAAGAGTTTGATCCTAAAAGAACATTGCCAGTGAAGAAGACATTAAAGGTAAAAGTCTACCTTGGATATGGCTGGAGCACAGATTTCAAGCCCACACACTTTGACAAGTGCTCTCCTCCTGACTTCTACACAAAGGTCCGTATAGTTGGAGTGCCAGCTGATTGTGGCAAGAGGAAAACAAGGGTTAAAATGGACAATTGGTTTCCTGTTTGGGACGAAGAATTTGAATTCCCTTTGAGTGTTCCTGAGCTTGCATTGCTTAGGATAGTAGTGAGGGAGAAAAATCAGGGAAAGGATGAGTTTGGTGGGCAGACTTGTTTGCCAGTCTCAGAGCTAAGACTTGGGTTTCGTGCAGTCCCTCTGTATAACAGAAAGGGAGAGAAATACAAATCTGTAAAGCTTTTAATGAGGTTTCAGTTTGTATGA 1614 0.404 MPLIPNDSALKSENQGPEEEEGFGYDMKTYNKYKWFLFFTRKYKINDLVPPLDLKEAFSEFAGGETRLSGEQLRRFLVELQGHEDCTLSESEQIIDKILKLRSRNHETSGGGDHHQHGLTLEDVFYFLLFDDFNSPLKAEVSSLSLSSLSFCVFGHNSYLTGNQLSSDCSDEPIIKALQRGVRAIELDLWPTPNKDDIKVVHGWTLTNPVSPIKCLEAIKKNAFVTSQYPVIVTIEDHLTPDLQSKFAENGSDKDKESINACDHKSDQQCPPDYKGLITIHAKKLKGSLKDKLRIDDEVRRLSWNEQTLEKASESHGTDIVRFTQKNILRVYPRGTRVQSSNFKPHIGWMYGAQMVAFNMQRHDKQLWLMQGMFRANGGCGYVKKPQIVMQKLQNDEEFDPKRTLPVKKTLKVKVYLGYGWSTDFKPTHFDKCSPPDFYTKVRIVGVPADCGKRKTRVKMDNWFPVWDEEFEFPLSVPELALLRIVVREKNQGKDEFGGQTCLPVSELRLGFRAVPLYNRKGEKYKSVKLLMRFQFV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1511 537 Pfam C2 domain 431 510 IPR000008 -
Sto5g1511 537 CDD C2_PLC_like 408 536 - -
Sto5g1511 537 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 301 387 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Sto5g1511 537 MobiDBLite consensus disorder prediction 1 23 - -
Sto5g1511 537 SMART C2_3c 410 517 IPR000008 -
Sto5g1511 537 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 155 249 - -
Sto5g1511 537 SUPERFAMILY EF-hand 39 136 IPR011992 -
Sto5g1511 537 Gene3D C2 domain 405 537 IPR035892 -
Sto5g1511 537 Gene3D Phosphatidylinositol (PI) phosphodiesterase 252 403 IPR017946 GO:0006629|GO:0008081
Sto5g1511 537 Gene3D Phosphatidylinositol (PI) phosphodiesterase 150 251 IPR017946 GO:0006629|GO:0008081
Sto5g1511 537 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 303 389 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Sto5g1511 537 Gene3D - 46 137 - -
Sto5g1511 537 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 410 536 IPR035892 -
Sto5g1511 537 SMART plcx_3 140 283 IPR000909 -
Sto5g1511 537 PRINTS Phospholipase C signature 146 164 IPR001192 GO:0035556
Sto5g1511 537 PRINTS Phospholipase C signature 172 192 IPR001192 GO:0035556
Sto5g1511 537 PRINTS Phospholipase C signature 267 284 IPR001192 GO:0035556
Sto5g1511 537 PRINTS Phospholipase C signature 328 349 IPR001192 GO:0035556
Sto5g1511 537 PRINTS Phospholipase C signature 349 367 IPR001192 GO:0035556
Sto5g1511 537 PRINTS Phospholipase C signature 503 513 IPR001192 GO:0035556
Sto5g1511 537 SUPERFAMILY PLC-like phosphodiesterases 155 391 IPR017946 GO:0006629|GO:0008081
Sto5g1511 537 ProSiteProfiles C2 domain profile. 389 519 IPR000008 -
Sto5g1511 537 Pfam Phosphatidylinositol-specific phospholipase C, X domain 151 254 IPR000909 -
Sto5g1511 537 SMART plcy_3 274 390 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Sto5g1511 537 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 250 536 - -
Sto5g1511 537 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 25 249 - -
Sto5g1511 537 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 250 536 IPR001192 GO:0035556
Sto5g1511 537 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 25 249 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1511 Sto-Chr5 10474917 10478567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1511 33 537 Acyl Lipid Metabolism Gene Families AT5G58690 47.660 2.33e-174 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1511 K05857 - gmx:100786997 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1511 5 10474917 10478567 Sto5g1511 5 10474917 10478567 CCT
Sto9g2162 9 25322762 25326223 Sto5g1511 5 10474917 10478567 ECH
Sto5g1511 5 10474917 10478567 Sto5g1511 5 10474917 10478567 ECH