Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2088 ATGGCAGTGCAAAACTCTCTTCAAATAACAAGCGCTACTCATGATGACGATGGCCGACTCAAAAGGAAggGAAACCTAACAAGTGCTGTTGCTCACATCATAACGGCCGTTATTGGTTCTGGAGTGCTTTCTTTGGCTTGGAGTACTTCTCAATTAGGATGGATCGCTGGCCCGATTTCTCTGCTTTTCTGTGCAATTGTTACCTACGTTTCCTCCTTCCTTCTCTCCGATTGTTACAGAACCTCCGATTCCAAATCTGGCAAAAGGAACTATACTTACATTGAAGCTGTTAGAGAATATCTCGGACAAAAAAGGACATGGTTGGCTGGTTTACTTCAATTTCTGACCTTGTATGGGACTAGTGTTGCTTACGTAATTACCACAGCAACTAGTTTAAGAGCAATTCTGAAATCAAACTGTTATCACAAGCAAGGACATGATGCTCCTTGTAATTTTGGATATACCTTGTACATGGTGCTGTTTGGAGTTGTTCAGATCATAATGTCATTCATACCAGATCTCCACAACATGGCTTGGGTTTCAGTTGTTGCTGCCATTATGTCCTTTACTTACTCTTTCATTGGACTTGGACTTGGCATTGCTCAAGTTATAGCAAATGGGAGAATAATGGGAAGCCTAGCAGGAGTACCTACTAAAAGCATAGCAGACAAATTTTGGTTAGTCTTCCAAGCACTTGGTGACATTGCATTTTCCTATCCATACTCAGTCATCCTTCTTGAGATACAGGATACTCTAGAGTCTCCTCCACCAGAAAACCAGACCATGAAGAAGGCATCCATGATAGCCATCTTCATTACAACATTCTTCTATCTTTGTTGTGGATGCTTTGGATATGCAGCATTTGGGAACAATACACCAGGAAATCTCTTGactgggtttgggttttatgagCCTTATTGGCTCATTGACTTAGCTAATGCTTGCATTGTTCTTCATTTGGTGGGAGGATATCAGATTTACAGTCAGCCCATATTCAGTGCTGCTGAAAGATGGAGCTCAAGGAAATTCCCAGACAGTGGCTTTGTGAATAACTATTACAAGTTGAAACTGCCTCTATTGCCAAGTTTCCACCTAAATCTCTTCAAGTTCCTCTTTAGAACTGCCTATGTGATCTCAACCACTGGACTTGCAATCCTCTTCCCTTacttcaatcaagttctaggaGTTTTAGGAGCCTTGAACTTTTGGCCTTTGGCTATATATTTCCCTGTGGAGATGTACTTTGTACAGAAGAATGTGCAAGCTTGGAGTAGAAAGTGGATCGTTCTTAGAACTTTCAGCTTTGCTTGCTTTCTTGTGACTGCTGTGGGCCTTGTTGGGTCACTCGAAGGGATCATATCGGCGAAACTTGGCTGA 1377 0.4067 MAVQNSLQITSATHDDDGRLKRKGNLTSAVAHIITAVIGSGVLSLAWSTSQLGWIAGPISLLFCAIVTYVSSFLLSDCYRTSDSKSGKRNYTYIEAVREYLGQKRTWLAGLLQFLTLYGTSVAYVITTATSLRAILKSNCYHKQGHDAPCNFGYTLYMVLFGVVQIIMSFIPDLHNMAWVSVVAAIMSFTYSFIGLGLGIAQVIANGRIMGSLAGVPTKSIADKFWLVFQALGDIAFSYPYSVILLEIQDTLESPPPENQTMKKASMIAIFITTFFYLCCGCFGYAAFGNNTPGNLLTGFGFYEPYWLIDLANACIVLHLVGGYQIYSQPIFSAAERWSSRKFPDSGFVNNYYKLKLPLLPSFHLNLFKFLFRTAYVISTTGLAILFPYFNQVLGVLGALNFWPLAIYFPVEMYFVQKNVQAWSRKWIVLRTFSFACFLVTAVGLVGSLEGIISAKLG 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2088 458 PANTHER OS05G0424000 PROTEIN-RELATED 9 456 - -
Sto9g2088 458 Pfam Transmembrane amino acid transporter protein 23 453 IPR013057 -
Sto9g2088 458 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 456 - -
Sto9g2088 458 Gene3D Amino acid/polyamine transporter I 19 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2088 Sto-Chr9 24770721 24774567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2088 15 453 Organic Solute Cotransporters AT5G09220 53.620 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2088 K24917 - gmx:100818535 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2088 9 24770721 24774567 Sto5g1794 5 13049782 13060444 CCT
Sto9g2088 9 24770721 24774567 Sto9g2088 9 24770721 24774567 ECH