Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1794 atgtgggaATTTTGTTGTGTAGGTAATACATGGAGTGCAGTGGCACATATTATAACAGGTGTGATAGGGGCAGGTGTGCTATCTCTAGCTTGGTCAGTGGCACAACTAGGGTGGATTGCAGGTCCATTGTTCATCATAATCTTTGCAATCATTACCATTATTTCTGCATTCCTCCTCTCTGATTCCTATAGATTCCCTCATCCTGTTCATGGCATCACCAGAAACCCCTCCTACATGGATGCTGTCAAGGTCTTCCTAGGTAGGTCAGCTCTTTCTACAATGGGTAACAGGTTAAATGGGTCCTCAGCTCGACCCACCTTGATAGTTAAACGATTGtgttttgcaCTTTTGCTTGTTCAAATGGGTGCACAGTACGAGACCTGGGCGATTCGGAAATCAAATTGTTATCACAAGGAGGGGCATGATGCTCCTTGTGAGTATGGAATAAGTTTGTACATGGTGCTATTTGGATTTGTTGAGATCTTCATGTCTTTCATACCAAATTTCCACAATATGGCATGGGTTTCTCTTGTTGCTGCAATTATGTCCTTTACATACTCTTTCATTGGATTAGGACTTGGCATTGCAAAAGTTATAGAAAATGGTAGAATTATGGGAAGTATAACAGGAGTACCTGCTAGTAATATTGCTGACAAACTATGGCTAGTCTTCCAAGCACTTGGTGACATTGCCTTTGCCTATCCATACTCAATCATTCTCCTTGAGATACAAgATACTCTAAAGTCTCCACCACCAGAAAACCAGACCATGAAGAAGGCCTCCGTGATATCGGTCTTCGTCACGACCTTCTTCTACCTTTGTTGCGGATGCTTCGGATATGCGGCCTTCGGGAACGATACGCCGGGGAACCTCTTGACCGGGTTCGGGTTCTACGAGCCTTACTGGCTTGTTGATTTCGCAAATGCTTGCATTGTGGTTCATTTGGTGGGAGGATATCAGATTTACAGTCAACCAATCTATTGTGGTGCTGATAAATGGTGCATGAGGAGGTTCCCCAATAGTGTGTTCATGAACAAGTCCTTCAAAGTGAAACTCCCTCTCTTGCCTGCTTTTCACTTCAATCTTTTCAGGCTGTGTTTCAGATCAGTGTATGTGATTTCCACAACCATATTGGCCATTCTCTTCCCTTACTTCAATCAAGTCTTGGGAGTGCTTGGTGCCCTCAATTTTTGGCCTTTGATTGTATACTTTCCTGTTGAGATGTACTTTGTGCAGAAGCAAGTTCAAGCTTGGACCACACAGTGGATTCTTTTTAGGGCTTTTAGCTTCTTTTGCTTTTTCATCTCCCTAGTGGGCCTCATTGGCTCACTTGAAGGGATTGTGAGTGAGAAACTTagttga 1362 0.4266 MWEFCCVGNTWSAVAHIITGVIGAGVLSLAWSVAQLGWIAGPLFIIIFAIITIISAFLLSDSYRFPHPVHGITRNPSYMDAVKVFLGRSALSTMGNRLNGSSARPTLIVKRLCFALLLVQMGAQYETWAIRKSNCYHKEGHDAPCEYGISLYMVLFGFVEIFMSFIPNFHNMAWVSLVAAIMSFTYSFIGLGLGIAKVIENGRIMGSITGVPASNIADKLWLVFQALGDIAFAYPYSIILLEIQDTLKSPPPENQTMKKASVISVFVTTFFYLCCGCFGYAAFGNDTPGNLLTGFGFYEPYWLVDFANACIVVHLVGGYQIYSQPIYCGADKWCMRRFPNSVFMNKSFKVKLPLLPAFHFNLFRLCFRSVYVISTTILAILFPYFNQVLGVLGALNFWPLIVYFPVEMYFVQKQVQAWTTQWILFRAFSFFCFFISLVGLIGSLEGIVSEKLS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1794 453 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 452 - -
Sto5g1794 453 PANTHER OS05G0424000 PROTEIN-RELATED 7 452 - -
Sto5g1794 453 Pfam Transmembrane amino acid transporter protein 8 447 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1794 Sto-Chr5 13049782 13060444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1794 8 448 Organic Solute Cotransporters AT5G09220 49.438 1.59e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1794 K24917 - gmx:100786621 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2088 9 24770721 24774567 Sto5g1794 5 13049782 13060444 CCT
Sto5g1794 5 13049782 13060444 Sto5g1794 5 13049782 13060444 ECH