Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2005 ATGGAATCCCCACAATCTGTTGTGTCACCATTCAAGAGCTCTGTGTTGTCTAAGGACATTGAGGTCAATGGAAAGGAATCTCGTGTGTCAAATCTAGAAGACAACTTCATCGGCGTCCTTGATGTTTACATTCACCAAGCGAGGGACATCCACAACATTTGCATATACCACAAGCAAGATGTTTATGCCAAGATTTGCCTCACTAGCCACCCTGAGAACACTGTATCCACCAAGATCATCAATGGAGGTGGAAGGAACCCTGTGTTTAATGAGAATCTTTGTCTGAATGTTAAAACTGTGGAGTCCTCTCTCAAATGTGAGATATGGATGTTGAGCCGGGTGAAGAACTACCTAGAAGACCAGCTTCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTTCTTGTCAAGAACAATGGTGGGACACTAGACAAAGAGTTCTCGCTTTCCTCAACAGATCTGTTTCATTCTCCAGCAGGTTTTGTTCGCTTGTCTCTTGCATACACCGGAGCATCGCCGGATGTTATGGTGATTCCTGCCGAAGAAGTGCCTCTGCCGGACTCAGAAACCTACGAGTCCCTTGCCAAAGACTTTGATAAAATCGAGTTCCCGGATCCGAAAATACTGAAAGAGGATCACCTGATGGTTTCAGAGTATTTTGGCATTCCATGTGAGGAGAGCTTAACCACATCTTCTGATGCTGCTGAAAGCCATAGTAGCTCTGAAGAAGCAGGTGTTCAGCTTGTGGAAAGCTTCTCAACAGCATGCAGCGTTGAGTCTGTCCAACCTCGTAAAATCGATGATTCTCCAAAGAGCAGTGTGTCAACAAATGGGGTATCTTCCTTATCTCCTTCGGTGCCTGCAAGCTCAGAATCATCCGAGCTCGAACAAGTCTCTGGAACCAAAAAGAAACCTGTTGTGGATGTCAAAGATGGTGAGAGTGACTCCTCCAATGGTGGGGCTCCAAATGATGCATTTTCAAAGCCTGTTTTGACTGTGAAGATCGAACCGGAACCAAAGGTGGTGCAGCAGGACATAGTAGACATGTACATGAAGAGCATGCAGCAATTTACTGAGTCATTAGCAAAGATGAAGCTTCCTAATTTGGACATTGAAAGTGGACCGACTAGTCCGGGGAACTCGAGCTCTGAGCAGAAGAATGGTAGCTCCCGTGTGTTTTATGGAAGTAGGGCTTTCTTCTAG 1200 0.4558 MESPQSVVSPFKSSVLSKDIEVNGKESRVSNLEDNFIGVLDVYIHQARDIHNICIYHKQDVYAKICLTSHPENTVSTKIINGGGRNPVFNENLCLNVKTVESSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKNNGGTLDKEFSLSSTDLFHSPAGFVRLSLAYTGASPDVMVIPAEEVPLPDSETYESLAKDFDKIEFPDPKILKEDHLMVSEYFGIPCEESLTTSSDAAESHSSSEEAGVQLVESFSTACSVESVQPRKIDDSPKSSVSTNGVSSLSPSVPASSESSELEQVSGTKKKPVVDVKDGESDSSNGGAPNDAFSKPVLTVKIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPNLDIESGPTSPGNSSSEQKNGSSRVFYGSRAFF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2005 399 MobiDBLite consensus disorder prediction 266 295 - -
Sto9g2005 399 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 173 IPR035892 -
Sto9g2005 399 Gene3D C2 domain 33 180 IPR035892 -
Sto9g2005 399 MobiDBLite consensus disorder prediction 367 399 - -
Sto9g2005 399 CDD C2 40 148 - -
Sto9g2005 399 MobiDBLite consensus disorder prediction 296 310 - -
Sto9g2005 399 ProSiteProfiles C2 domain profile. 21 146 IPR000008 -
Sto9g2005 399 PANTHER EXPRESSED PROTEIN 1 399 - -
Sto9g2005 399 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 399 - -
Sto9g2005 399 SMART C2_3c 39 142 IPR000008 -
Sto9g2005 399 MobiDBLite consensus disorder prediction 372 391 - -
Sto9g2005 399 MobiDBLite consensus disorder prediction 260 330 - -
Sto9g2005 399 Pfam C2 domain 38 136 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2005 Sto-Chr9 24063081 24064310 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2005 - - gmx:100796499 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2005 9 24063081 24064310 Sto5g1874 5 13796250 13797449 CCT
Sto9g2005 9 24063081 24064310 Sto9g2005 9 24063081 24064310 ECH