Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1874 ATGGCTGATCTAGAAGACTTCATTGGTTTTCTTGATGTGTACATACATCAAGCTAGAGACATCCATAACATTTGCATTTACCACAAGCAAGATGTTTATGCTAAGATTTGTCTAACTAGCAACCTTGATGATACTGTGTCCACCAAGATCATCAATGGGGGTGGAAGGAACCCTGTGTTCAATGAGAATCTTCGCTTGAATGTTAAGACTATTGATTCCTCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTGAAGAACTATCTAGAAGATCAGCTTCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAATACTTGTCAAGAATGGAACAACACTTGAGAAAGAgttctctctttcttccacTGATCTGTTTCATTCCCCAGCTGGTTTTGTGAAATTATCTCTTGCTTACAATGGAGCTTCACCTGATGTCATGGCGATTCCTCCTCCTGTTTCCTCCGAGGTAGCAGCTTCCCATGTTGATGTTGAAGTGTTGAACTCCCAAGAGACATCATCAGAGTCTCTAGCTAGAGATTTGGATAAAATTGAGTTCCCTGATCCTAAGGTTGTGAATGAAGACCACCTTATGGTTTCAGAGTATTTTGGGATTCCTTGTGAGGAGACTCAGTGTTCTGAAAGCTTGGCCACTTCTGATGCTGAGTATCATAGTGCTGAAGCAGGTGTTCAGCTTGTAGAAAGCTTCTCAGCATGCAGTTTTGAGTCTGCTCAAGCTCAACCTTCTAATAACAAGGTTGAGTCTCCACCAAGCAGTGTATCAACCAATGGGGTTTCTTCCCCTTCAGTGCCTGCATGCTCAGAGTCATCTGAtgctcctcctcctcctgaGGAACAAGTTTCTGGTGTTAAAGAAAAATGTGTGGATGCTAAGGATGGTCATGGTCATGGTGGTGGTGAGAGTGATTCCTCAAATGGGGTGGTTCCAAATGATGATGATTCATTCCCAAAGCCTGTGGTGACTGTGAACATCGAGCCGGAGCCGACAATGGTGCAGCAAGATATCGTAGACATGTACATGAAAAGCATGCAGCAATTCACCGAGTCCTTAGCGAAAATGAAGCTTCCGGATATCGAAACAGCGCCGACTAGTTCAGGAAACTCGAGCTCTGAGCAAAAACTACAGCCATCATCCAAGAACAACAGTAGCTCCCGTGTGTTTTATGGAAGCAGAGCTTTCTTCTGA 1200 0.4233 MADLEDFIGFLDVYIHQARDIHNICIYHKQDVYAKICLTSNLDDTVSTKIINGGGRNPVFNENLRLNVKTIDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEILVKNGTTLEKEFSLSSTDLFHSPAGFVKLSLAYNGASPDVMAIPPPVSSEVAASHVDVEVLNSQETSSESLARDLDKIEFPDPKVVNEDHLMVSEYFGIPCEETQCSESLATSDAEYHSAEAGVQLVESFSACSFESAQAQPSNNKVESPPSSVSTNGVSSPSVPACSESSDAPPPPEEQVSGVKEKCVDAKDGHGHGGGESDSSNGVVPNDDDSFPKPVVTVNIEPEPTMVQQDIVDMYMKSMQQFTESLAKMKLPDIETAPTSSGNSSSEQKLQPSSKNNSSSRVFYGSRAFF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1874 399 MobiDBLite consensus disorder prediction 358 399 - -
Sto5g1874 399 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 3 399 - -
Sto5g1874 399 MobiDBLite consensus disorder prediction 244 331 - -
Sto5g1874 399 SMART C2_3c 10 113 IPR000008 -
Sto5g1874 399 MobiDBLite consensus disorder prediction 365 393 - -
Sto5g1874 399 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Sto5g1874 399 CDD C2 11 118 - -
Sto5g1874 399 MobiDBLite consensus disorder prediction 287 303 - -
Sto5g1874 399 Gene3D C2 domain 6 147 IPR035892 -
Sto5g1874 399 Pfam C2 domain 11 116 IPR000008 -
Sto5g1874 399 PANTHER EXPRESSED PROTEIN 3 399 - -
Sto5g1874 399 MobiDBLite consensus disorder prediction 244 272 - -
Sto5g1874 399 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 144 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1874 Sto-Chr5 13796250 13797449 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1874 - - gmx:100796499 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2005 9 24063081 24064310 Sto5g1874 5 13796250 13797449 CCT
Sto5g1874 5 13796250 13797449 Sto5g1874 5 13796250 13797449 ECH