Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2002 ATGAGGCAAAGCAGAAACGCAGAAAGTGCCGAGACTCGTTTCTTCGGTAGCATCTCGTCCTCATCCATCAGAAATCTTCTTCCCAGATCAATCTCTTCCAAACACAAAtctacctcaaaccctaaaatcccCAAATCAGATGCCGAAAACACTCCACCTGCAGATCCAAACATCCAGCTCCACCATGACCAATCGTCGTTGCCTACTACTACCGCCATCAAGCAATTGCAGCCCACAACACTTTCTTCCCAGATCCAGGTTGTTGAATCGAAGGCCCCTCAGGACTCAACAGTAAAGGTTGTAGTCCGAATTAGACCTGTTGATAGTGATGGAAAAGAGGAAGATCAGTCCGTTAAGAAGGTTTCTTCTGATACATTATGTATTGGGGACAGGCAATTCGCATTTGATTTGGTTTTTGATTCGAACTCCAATCAGGAAGATATTTTTCTGTCAGTTGGTGTCCCCCTGGTTAAAAATGCTCTAGCTGGTTACAACACTTCGCTCTTGTCATATGGTCAGTCTGGAAGCGGAAAGACTTATACAATGTGGGGTCCCCCAAGTGCCATGGTTGAAGAACCCTCGCCTAGTAGTCACCAGGGACTTGTTCCTCGGATCTTCAAAATGTTATTTTCTGAACTTGAGAGAGAGCAACATATCTCTAAAGGGAAACAGTTTAACTATCAATGCCGTTGTTCTTTTCTGGAGATATACAATGAACAAATTGGGGATTTACTTGATTCAATCCAGCAGAATCTTGAGCTGAAGGAGGATTCCAAAAATGCATGGTATGTTGAGAATCTGACTGAGGAATATGTCACTAGCTATGAGGATGTgactcaaattattattaagGGCCTCTCTAGCAGAAAAGTTGGAGCAACCAGCTTGAATTCTAAGAGCTCCAGATCACATATCATTTTCACTTTCATCATTGAGTCTTGGTGTAAGGGAACCTCATCGAAGGTTTTTGGTAGTTCAAAAACAAGCAGAATTACCCTTATTGATCTTGCTGGAATGGACACAAATAAAGTTGAAGATGCAGGCAGAATATGTCCTAAGGAAAGCAGATATGTAAAGAAGTCATTATCTCAGCTAGGGCGCCTAGTGGATGCTCTGACTAAAGAAACTCAGTCTGTTGAAGCTCAAGAAATATCAGACAGGAGTTCCTGTTTAACTCGTTTACTACAAGAACCACTTGGTGGAAACAGAAAACTCTCGGTTATCTGTTACATCTCCCCTGATAACAAGAGCAATGCTGAAACACTGAGAACTCTCAGATTTGGACAGCGAATAAGATCCATTAGGAATCAGCCGGTTATCAATGAAATAAAAGAGGATGGACCTAATGGTTTGAGTGATCAAATCCGGCACCTTAAGGAagaactaattaaaacaaaggCTAATGTTCAAAGCTCAACTGGGAGCACAAATGGATACTTCCAAGGGCGTAATGTGCGGGAAAGCTTAAATCAATTGAAAGTTAGCTTAAACCGCTCTTTACTCCTACCTCACATAGATAATGATACTGAAGAAGAGGTAAATGTGGATGAGGATGACATTAGGCAACTAAACCAGCAGATAAACGAATTGTATAGTTCTTGTGAAGGGGTGAATCCAAAGGACATTCCTGTTAGTGAAGATTGTGTCCAGTTTTATTCTGTTGGGGAATGCTGTGATGCAGACATGATCATTgatgatgaaattgaaaaagagaaaatgaACGACCAGTCCTGTACTGCTGACATGTCAAGGGCTATTAAATCTACATTCAGAAGCAACATTTCTGTCAGTTCATGCTGTGAAACTCCAACCTTTGATGAACCACTGTTGTCCGAGTCTCCAAAAATCAGAAAAACCCAAAGGAAAAGCATGGCTGTTTCATCAAGTTATCTTGGAAGTTGGAATAATGTGGCTGAGAGTTCCAGTTTAAGAAAAGACATGTCAGGACAATCATTTAATCATGGTGAAAATGTGCGATCCTCATTACTTTCAAGTAAGGTTTTGCCAGGCCCCACTGAGTCGTTGGCTGCTAGCCTTCAGAGAGGCTTACAGATAATTGACCAACACCAGACGAACTCTGCATTGAACAAATCTTTAGCTTCCTTCTCCTTTGACAACTTAACCTTGACATCCTGCCCAGAAATTGACAGGGTAGGTTCTTCCGTGCAAACAACACAGGAGAGACCTAATAGTGGTGAAGTACCCGCTACTTTCCTTTGTGATTCTTGCGGCAAGAAGGTATCTGATCAAGCTTCTGCTGAGGTCCAAGATAGCTTGAATTCCTGGATTGACAAAGTTGAAAAGGCAGAAAACTCTGATAGACTTGAAGATAAAGTTCCACAAcaCTTGCAAAATGAAATGGCAAAAGCCatcaagagagagaaggagctCGAAATTGTCTGCAAGGAGCAAAGAGCTAGAATTGACCAGCTAAGTCAATTGGTGGAGAAATACAAAGGAGAAAAGGATTTAAACTCCATCGTTGTGTATGGTCAAGAAGGCAACGAGCAGACTACAAATGAAGAATATAACTCACTGAAAGATGAAGATAAGCTTCTAAGGGGCTCTTTGTCAGAAAATCTTTTACGACATATTTCTGAGGGAAATCGTGAAATTAAAGAAGTCCAGGAGGAAGACTTAACTCAAAGAGACAACTCTTTTGATGCTACAGAGAAGGAAGCACTTCTCAAGGAAATTCAGAATCTAAGAAGCAGGTTGCAGTTATGCAGTGATGGACCAATTAAAAAGTCCACAGACAAATTGAGATCTTCGCTAATGTCGAGATCCACGCAGCTGCAAAAAGGTGTACTTTTCCATGATAATGGTGGGGAAGACATAGAGAAAGAAAGACAGAGATGGACTGAAATGGAAAGTGAGTGGATTTGTCTCACTGATGAACTGAGAGTTGATCTTGAGTCAAACCGCCGGCGTGCAGAGAGGGTGGAGATGGAATTGAAATCAGAGAAGAAGTGCACCGAAGAGTTGGACGATGCATTGAAAAGAGCTGTTCTCGGACATGCAAGAATGGTAGAACACTATGCTGAGCTACAAGAAAGATATGACGACATAGTTGCAAAGCACAGTGCTATAATGGCAGGGATAGCAGAGATGAAGAAGGCAGCAGCAAAGGCAGGCAATAAGGGTCAAGCTAAATTTGCCAAAGCTCTTGCAGCTGAGCTTTCTACAATGAGagtggagagagagagggagagagaattTCTGAAAAAGGAGAACAAGAGTCTCAAGATTCAACTTCGAGACACTGCAGAAGCTGTCCATGCAGCTGGAGAACTACTTGTTAGACTTAGAGAAGCTGAGCATGCAGCATCTGTTGCCCAGGAGAATTTtgcaaggatggaagaagataATGAGAAGTTGAAAAAGAAAGTGGAGAAGCTGAAAAGAAAGCACAAGATGGAGATGATAACCATGAAGCAATACCTAGCAGAGAGCAAACTACCAGAGTCTGCACTGCAACCTCTGTACAGAGAGGACTCTGATGATATTGTACACAACAAGGGAATATCCTATGCAGATGATGATGATCAGGCATGGAGAGCAGAATTTGGAGTAATCTATCAACACCATTACTAG 3594 0.4023 MRQSRNAESAETRFFGSISSSSIRNLLPRSISSKHKSTSNPKIPKSDAENTPPADPNIQLHHDQSSLPTTTAIKQLQPTTLSSQIQVVESKAPQDSTVKVVVRIRPVDSDGKEEDQSVKKVSSDTLCIGDRQFAFDLVFDSNSNQEDIFLSVGVPLVKNALAGYNTSLLSYGQSGSGKTYTMWGPPSAMVEEPSPSSHQGLVPRIFKMLFSELEREQHISKGKQFNYQCRCSFLEIYNEQIGDLLDSIQQNLELKEDSKNAWYVENLTEEYVTSYEDVTQIIIKGLSSRKVGATSLNSKSSRSHIIFTFIIESWCKGTSSKVFGSSKTSRITLIDLAGMDTNKVEDAGRICPKESRYVKKSLSQLGRLVDALTKETQSVEAQEISDRSSCLTRLLQEPLGGNRKLSVICYISPDNKSNAETLRTLRFGQRIRSIRNQPVINEIKEDGPNGLSDQIRHLKEELIKTKANVQSSTGSTNGYFQGRNVRESLNQLKVSLNRSLLLPHIDNDTEEEVNVDEDDIRQLNQQINELYSSCEGVNPKDIPVSEDCVQFYSVGECCDADMIIDDEIEKEKMNDQSCTADMSRAIKSTFRSNISVSSCCETPTFDEPLLSESPKIRKTQRKSMAVSSSYLGSWNNVAESSSLRKDMSGQSFNHGENVRSSLLSSKVLPGPTESLAASLQRGLQIIDQHQTNSALNKSLASFSFDNLTLTSCPEIDRVGSSVQTTQERPNSGEVPATFLCDSCGKKVSDQASAEVQDSLNSWIDKVEKAENSDRLEDKVPQHLQNEMAKAIKREKELEIVCKEQRARIDQLSQLVEKYKGEKDLNSIVVYGQEGNEQTTNEEYNSLKDEDKLLRGSLSENLLRHISEGNREIKEVQEEDLTQRDNSFDATEKEALLKEIQNLRSRLQLCSDGPIKKSTDKLRSSLMSRSTQLQKGVLFHDNGGEDIEKERQRWTEMESEWICLTDELRVDLESNRRRAERVEMELKSEKKCTEELDDALKRAVLGHARMVEHYAELQERYDDIVAKHSAIMAGIAEMKKAAAKAGNKGQAKFAKALAAELSTMRVEREREREFLKKENKSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAQENFARMEEDNEKLKKKVEKLKRKHKMEMITMKQYLAESKLPESALQPLYREDSDDIVHNKGISYADDDDQAWRAEFGVIYQHHY 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2002 1197 PANTHER KINESIN-LIKE PROTEIN KIN-12F 81 1197 - -
Sto9g2002 1197 Coils Coil 858 878 - -
Sto9g2002 1197 Gene3D Kinesin motor domain 94 475 IPR036961 -
Sto9g2002 1197 MobiDBLite consensus disorder prediction 25 62 - -
Sto9g2002 1197 SMART kinesin_4 95 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto9g2002 1197 Pfam Kinesin motor domain 105 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto9g2002 1197 PRINTS Kinesin heavy chain signature 163 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto9g2002 1197 PRINTS Kinesin heavy chain signature 294 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto9g2002 1197 PRINTS Kinesin heavy chain signature 330 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto9g2002 1197 PRINTS Kinesin heavy chain signature 384 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto9g2002 1197 PANTHER CENTROMERE PROTEIN E 81 1197 - -
Sto9g2002 1197 ProSiteProfiles Kinesin motor domain profile. 97 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto9g2002 1197 Coils Coil 1064 1091 - -
Sto9g2002 1197 Coils Coil 968 988 - -
Sto9g2002 1197 Coils Coil 794 821 - -
Sto9g2002 1197 Coils Coil 506 526 - -
Sto9g2002 1197 MobiDBLite consensus disorder prediction 25 46 - -
Sto9g2002 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 467 IPR027417 -
Sto9g2002 1197 Coils Coil 1102 1143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2002 Sto-Chr9 24039829 24045613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2002 97 442 Miscellaneous Gene Families AT4G39050 37.360 2.83e-50 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2002 K10400 - gmx:100782128 1571.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2002 9 24039829 24045613 Sto5g1877 5 13822900 13829295 CCT
Sto9g2002 9 24039829 24045613 Sto9g2002 9 24039829 24045613 ECH