Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1877 ATGAGGCAAAACACTAACGCAGAAACTGCCGAGAGTCGTTTCTTGGGCAGAATTTCGTCGTCGTCGCCGCTCAGAAACCTTCGTCCGCCCCAGTCGATCTCATCCAAGCAGAAACCCGCCTCAAACCCTAGAATTCCCAAATCAAATGCCGAAAACGCTCCCCCTGCGGATCCAAATATTCAGATTGAAGACGATGAACAGTCGTCGTTGCCTGCCGCGACCAAGCAATTACAGATCGGAATCGCCGAATCGAAGGCTCCTCTTGAGCCGTCGACGCCTCAGGACCGACCTGTGAAGGCAAGTTGGAATATAGATGTTGTAGTGCGAATTAGACCTTCTAACAGTCGTGGAGTAGAAGGAGATCGAATCATTAGGAAGATTTCTCCTGATACGTTGTGTGTTGGAGACAGGCAATTCACTTTTGATTCGATTTTTGATTCTAACTCCAGCCAGGAAGACATTTTTCAATCAGTCGGAGTTCCATTGGTTAAGAATGCTTTAGCTGGTTACAACACTTCACTTCTGTCATATGGTCAGtcTGGAAGTGGAAAGACTTATTCTATGTGGGGTCCGCCAAGTGCCATGTTTGAGCATCCCTCCCCAAGTAGTCACCAGGGAATTGTTCCTCGAATTTTCCATATGTTATTTTCGGAGCTTGAGAGAGAGCAAAGCGTACCTGAAGAGAAACAGTTCAACTATCAATGTCGTTGCTCTTTCCTTGAGATATATAATGAACAAATTGGGGATTTACTTGACCCATCCCAGAGGAACCTTGAGATGAAGGATGATTCCAAGAATGCGTTGTATGTTGAAAATCTGACCGAGGAATATGTCACTAGCTATGAAGATGTGACACAAATTCTGATTAAGGGCCTTTCAAGCAGAAAAGTTGGGGCTACAAGCTTAAATTCGAAAAGCTCCAGATCACATATAATTTTCACTTTCGTCATTGAGTCCTGGTGTAAGGGAACCTCATTAAATGGTTTCAGTAGCTCAAAAACGAGTAGAATTAGCCTTATTGATCTTGCTGGGCTCGACAAAAACAATGTTGATGAGGCAAGCAAACAATGTATAAAGGAGAGCAGAAATGTGAAGAAGTCATTATCTCAACTTGGGCGCGTAGTGGATGCTCTGACTAAAGATTGTCAATCTGGAAAAGCTGGAGACATTCCAAATGGGAATTCTTGTTTAACACGTTTACTGCAAGAATCACTGGGTGGAAATGCCATGCTCTCAGTAATTTGTTCCATTTCCTGTAATAACAAAAGTAATGGTGAAACACTCCGGACACTCAGATTTGGACAACGAGTAAGGTCCATTAGAAATGAGCCAGTCATCAATGAAATAAAGGAGGATGAAGTTAATGATTTGAGTGATCAAATCCGGCAGCTGAAGGAAGAACTTATTAGAGCAAAGACTGATGTTTATAGATCAACTGGGGGTAAAAATGCATACTTCCAAGGACATAATGTGCGGGAAAGCTTGAATCAATTAAGGGTTAGCTTAAACCGCTCTCTACTCTTACCTCACATAGATAATGATACTAATGAAGAGATAAATGCTGGTGAGGATGACATAAGGCAATTACGCCAGCAGATTGATGAACTGTATCGCTCATGCGAGGGGAACTTTAAAGACGTATCTGCCAGTGAAGATTGTACCCAGTTTTATTCTGTTGGGGAAAATTCTGAGGCAGACATGACCAGTGgtgatgaaattgaaaaagagGAAGTAACTTCTGAAAAACCATTCACTCATATCTATGACGAAGATAGCTTAACATCAACAGATAACCTTGTATCTAACACCTCAAGGACAATCAAATCTACATTCAGAGATAGCATTTCAGTCAGCAAATGTGATCAATCTCTTATCGTTGACGAACCGCCGTTGTCTGAGTCTCCAAAAATCAGAAATACCCAGAGGAAAAGCATGgtcatttcatcaagttgtCTTGGAAGCTGGAAAAATGTGGCAGAGAGTTCCAGTTTCAGTAATAGTGAGTTAAGTCAATCATTTAAACAGGGTGAAAATCTGCGATCCTCGTTACAGTCAAGCAAGGTTTTACAAAGCCCCACAGAGACATTGTCAGCAAGCCTTCAGAGAGGCTTACAGATAATTGATTATCACCAGCGTAACTCAGCATTGAACAAATCTCGAGCTTCCTTCTCGTTTGAGCACTTAAACTTGATACCATGTCCAGAAACTAATGAGGTTGATCCTTCTACGCATACAATGCTGGAGAGGCCTTCTAGTGATGAAGTATCTACCTCTTTACTTTGTGCATCTTGCCAGAAaaaaatatctaataaaaattcCACTGAGGTTCAAGATAGCTTGAAGTCATCCATTGACGCAGTTGATAAAGAAGGATTTTCTGATGGGATGACAGATGAAGTTCCAAAACATTCGGAAATTGTAATCGAAAAACCCATCAATAGAGAGAAGGAGCTCGAAGATGTTTGTAAGGAGCAGGCAGCCAGAATTGAGCAGCTAAATCAATTGgttGAGAAATACAAAGGTGAAAGAGAATGCGACAAGCAAACACAAAATGAAGAGTATAACTCGTTGAAAGATGTAGACAAGCTTCGGACCGTCATTTCATCACAAGAGAATTTACCAAATATTACAGAGGACACATGTGAAATCAAAGAAGTCCAGGAAGAGTTAGCACAAAGTGACAACTCTTTTAGTGCTAATGACAAGGAAGCACTTCTTGCGGAAATTCAGAGTCTAAGAAGCAAGTTGCAGTTGTGTGATGATGCACCAGTTAAAAATTCCACAGACAAACTTAGGTCTTCATTAATATCAAGATCCATACAACTGCGAAAAAGTGGTGTATTTCTTCATGATAATAATGCTGGGGAAGACAtagagaaagaaagacaaagatGGACAGAAATGGAAAGTGAGTGGATTTGTCTCACAGATGAACTGAGAGTAGACCTTGAGTCCAACCGCCAGCGTGCAGAGAAGGTGGAGATGGAACTGAGGTTAGAGAAGAAGTGCACTGAAGAGTTAGACGATGCTCTTAAAAGATCAGTTCTGGGCCATGCTAGAATGGTGGAACACTATGCTGATCTTCAAGAAAAATATGATCACTTGGCTGCAAAACACAAAGCTATAATGGAAGGGATAGCAGAGGTGAAGAAGGCGGCAGCAAAGGCAGGAAAAAAGGGTCATGCTCGCTTTGCCAAATCTCTTGCTGCTGAACTCTCTGCACTGAGAgtggagagggagagggagagggactTCTTGAAAAAGGAGAACAAGAGTCTCAAAATTCAACTTCGAGACACTGCAGAAGCTGTTCATGCGGCTGGAGAATTACTTGTTAGACTCAGAGAAGCTGAGCAAGTCGCATCTGTTGCAGAGGAGAATGTTTCAAAGGTGcaagaagagaatgaaaagtTGAGAAAGCAAATGGAGAAGCTCAAGAGGAAGCACAAGATGGAGATGATAACCATGAAGCAGTACCTTGCAGAGAGCAAGTTACCAGAATCTGCACTGCAACCACTATACCGAGAGGATTCTGATGTTGTAGGCCACAATGCAAATGAGGAGCAGGCGTGGAGAGCAGAATTTGGAGCAATCTATCAAGAGCATCTCTAA 3612 0.4078 MRQNTNAETAESRFLGRISSSSPLRNLRPPQSISSKQKPASNPRIPKSNAENAPPADPNIQIEDDEQSSLPAATKQLQIGIAESKAPLEPSTPQDRPVKASWNIDVVVRIRPSNSRGVEGDRIIRKISPDTLCVGDRQFTFDSIFDSNSSQEDIFQSVGVPLVKNALAGYNTSLLSYGQSGSGKTYSMWGPPSAMFEHPSPSSHQGIVPRIFHMLFSELEREQSVPEEKQFNYQCRCSFLEIYNEQIGDLLDPSQRNLEMKDDSKNALYVENLTEEYVTSYEDVTQILIKGLSSRKVGATSLNSKSSRSHIIFTFVIESWCKGTSLNGFSSSKTSRISLIDLAGLDKNNVDEASKQCIKESRNVKKSLSQLGRVVDALTKDCQSGKAGDIPNGNSCLTRLLQESLGGNAMLSVICSISCNNKSNGETLRTLRFGQRVRSIRNEPVINEIKEDEVNDLSDQIRQLKEELIRAKTDVYRSTGGKNAYFQGHNVRESLNQLRVSLNRSLLLPHIDNDTNEEINAGEDDIRQLRQQIDELYRSCEGNFKDVSASEDCTQFYSVGENSEADMTSGDEIEKEEVTSEKPFTHIYDEDSLTSTDNLVSNTSRTIKSTFRDSISVSKCDQSLIVDEPPLSESPKIRNTQRKSMVISSSCLGSWKNVAESSSFSNSELSQSFKQGENLRSSLQSSKVLQSPTETLSASLQRGLQIIDYHQRNSALNKSRASFSFEHLNLIPCPETNEVDPSTHTMLERPSSDEVSTSLLCASCQKKISNKNSTEVQDSLKSSIDAVDKEGFSDGMTDEVPKHSEIVIEKPINREKELEDVCKEQAARIEQLNQLVEKYKGERECDKQTQNEEYNSLKDVDKLRTVISSQENLPNITEDTCEIKEVQEELAQSDNSFSANDKEALLAEIQSLRSKLQLCDDAPVKNSTDKLRSSLISRSIQLRKSGVFLHDNNAGEDIEKERQRWTEMESEWICLTDELRVDLESNRQRAEKVEMELRLEKKCTEELDDALKRSVLGHARMVEHYADLQEKYDHLAAKHKAIMEGIAEVKKAAAKAGKKGHARFAKSLAAELSALRVERERERDFLKKENKSLKIQLRDTAEAVHAAGELLVRLREAEQVASVAEENVSKVQEENEKLRKQMEKLKRKHKMEMITMKQYLAESKLPESALQPLYREDSDVVGHNANEEQAWRAEFGAIYQEHL 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1877 1203 Coils Coil 1069 1103 - -
Sto5g1877 1203 MobiDBLite consensus disorder prediction 1 62 - -
Sto5g1877 1203 Coils Coil 976 1000 - -
Sto5g1877 1203 Coils Coil 815 849 - -
Sto5g1877 1203 MobiDBLite consensus disorder prediction 1 48 - -
Sto5g1877 1203 Coils Coil 512 539 - -
Sto5g1877 1203 Pfam Kinesin motor domain 136 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1877 1203 PRINTS Kinesin heavy chain signature 169 190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1877 1203 PRINTS Kinesin heavy chain signature 300 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1877 1203 PRINTS Kinesin heavy chain signature 336 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1877 1203 PRINTS Kinesin heavy chain signature 390 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1877 1203 SMART kinesin_4 101 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1877 1203 ProSiteProfiles Kinesin motor domain profile. 103 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1877 1203 PANTHER CENTROMERE PROTEIN E 70 1203 - -
Sto5g1877 1203 Gene3D Kinesin motor domain 99 479 IPR036961 -
Sto5g1877 1203 Coils Coil 1114 1155 - -
Sto5g1877 1203 Coils Coil 447 474 - -
Sto5g1877 1203 PANTHER KINESIN-LIKE PROTEIN KIN-12F 70 1203 - -
Sto5g1877 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 473 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1877 Sto-Chr5 13822900 13829295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1877 103 468 Miscellaneous Gene Families AT4G39050 35.657 1.51e-49 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1877 K10400 - gmx:100782128 1639.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2002 9 24039829 24045613 Sto5g1877 5 13822900 13829295 CCT
Sto5g1877 5 13822900 13829295 Sto5g1877 5 13822900 13829295 ECH