Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1897 ATGGTGGCCCTCTCCTTTGTGTCTAAAGCGAAGTCCGCCTTCCATTCTGCGGCTGCGAAAGCGGAGCGCGTTATCGAGGATTTCAAATCCGAACGAGGTTCTGCTTGCTGCTacatgccttttttttttttcgatttGGTCATTTCCATATCCGTTTATCTATTGACGCAATGGTTGATCGGTGGTGAAGGTGCTGATAAAGAATCGCCTGACAATTTGAGTAGGCAACCAGAAGATGAATCTCCTCAGAGCGAGTGGGAGTCGAAGGTAATGGCAATCGGAATGATTATGGTTCTTCGTTTGAGGATTAAGAAAATTCGAACTGGGAGAAAAGACAAAACAATTAATGTAGGCTTTAGAAGCAGTTCCTCTGGCGAATCTTCACCTGTTCAAGAGAAACTCTCCGCAGTGAAGGCTTTAGTGTTGAATGAAAAGGAGGGCAAACTTACCTCCGAGTTTAGTAAAGATGAGAAAGTTCTATATTTGATTAATTCTCTGCTTTATCCAGAGGGAGAATTCCTCAGAAGGAAGATCAACTATGGTAGTGAGGAAACTGACATATCATCCCTGCCAAGAGACATTCATGGCGCTCCTCCTGAAAGCCTTATTGTTAAGCTAGCTGAAGTCATTGGAAACTTCAAGAACCTTCGAAAAATGGCTCTGTTTTGGTGCAGGGTTGTTGTTGAACTGAGAAAATTTTGGTCTGAGGAGCAACATTTACCCGGAGTCCCCATGTATGAGATTCCAGATCTGAGGTCATGTCTCctctatcaacaatttcaagtAATTAACTGTTGCATCTCCCGGAAAAGGCATCGCATCATTGCCACCGAATCCCTGGACTCTATGATGTTAAAAGCCAGTTCAAATTTAGATGAATCTGCTGATTATAGTGGCAGAATTACTTCAAACCCTGTTCCATATGCTAAATTAAGTTCTGGGGAGTTGGTTGTTCGACTTGGTGCTGATTGCCCTTCTGGAAATCTGGCATTGTTGGAAACTGGAGAGCCTATGTATTCTCCTGTCACCCAGGAAGGACCTTTGCTTACAGAAGATCTGATCAAAGAAACAGAGGAGTTTGTGCTGCAGACAGGAAGTGTTGGTGCTGCATGCTCTCAACTCCTCTCCGATATGCAGGCTTTCAAGGCTGCAAATCCTGGCTGCATTATGGAAGATTTTGTGAGATGGTACTCTCCTCCTGATTGGATAGAAAGTGAGTCAAGTACCGAGGCACAAGAATCTTTAGATGGTAGTGAGTCATTGTCCACCAAGGGTCAGCTTAGTTTGCGGATGCAAAAAGAAGGTAATTTATGGCGTGAATTATGGGATACAGCTAAACCAGTTCCAGCTGTTAAACAGGCACCTCTATTTGATGAGGATTTGGCAGCGGAGGGCATCTTGAATGGTTTTGAGAACATCCAGCCTTGTCAGCTGTTTGAACAATTGTTTATTTCATTGCTTGGCTTAGGATTTGCAATTGCTGAACCTATGCTATCTGGAAACAAAGACTTCTCAAAGTTGTTCTATGATTGCAAGGAGTACATCCTCGTTACCTGTCAGGGCGACAATTGGAGCGAGAAAGTGGATGACCTTTGCCAGGTATATGAATCAGTGGAGACAATGTTACTGAATCCTGAGGAAGCACTAAAGATGATGAGGCAAACTGAAGAACCAACTTTGACTACCGGCGAGCTCAAGCATCGGTTTAAGAGGCTCAGCCTTATCTTCAGTGCCAAAGACAAATTGCTAACAAAGCCTATCTCCAAATTCAAGATAAGCAATGAAGAAAACACAATTCGACAATCATTTTCAAGTTTCTTAGACAGCAAGTCATCTTTATTTTCAAAGAAGTCCAAGCCTGAAAGCACAGTCAATACTACTAAGAACCCTCCTTGTGTTGAAAATGATTGGACGCTTGTTTAG 1923 0.4223 MVALSFVSKAKSAFHSAAAKAERVIEDFKSERGSACCYMPFFFFDLVISISVYLLTQWLIGGEGADKESPDNLSRQPEDESPQSEWESKVMAIGMIMVLRLRIKKIRTGRKDKTINVGFRSSSSGESSPVQEKLSAVKALVLNEKEGKLTSEFSKDEKVLYLINSLLYPEGEFLRRKINYGSEETDISSLPRDIHGAPPESLIVKLAEVIGNFKNLRKMALFWCRVVVELRKFWSEEQHLPGVPMYEIPDLRSCLLYQQFQVINCCISRKRHRIIATESLDSMMLKASSNLDESADYSGRITSNPVPYAKLSSGELVVRLGADCPSGNLALLETGEPMYSPVTQEGPLLTEDLIKETEEFVLQTGSVGAACSQLLSDMQAFKAANPGCIMEDFVRWYSPPDWIESESSTEAQESLDGSESLSTKGQLSLRMQKEGNLWRELWDTAKPVPAVKQAPLFDEDLAAEGILNGFENIQPCQLFEQLFISLLGLGFAIAEPMLSGNKDFSKLFYDCKEYILVTCQGDNWSEKVDDLCQVYESVETMLLNPEEALKMMRQTEEPTLTTGELKHRFKRLSLIFSAKDKLLTKPISKFKISNEENTIRQSFSSFLDSKSSLFSKKSKPESTVNTTKNPPCVENDWTLV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1897 640 MobiDBLite consensus disorder prediction 68 84 - -
Sto9g1897 640 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 100 639 IPR045700 GO:0005096|GO:0043547
Sto9g1897 640 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 32 IPR045700 GO:0005096|GO:0043547
Sto9g1897 640 Pfam Rab3 GTPase-activating protein catalytic subunit 318 470 IPR026147 -
Sto9g1897 640 MobiDBLite consensus disorder prediction 65 84 - -
Sto9g1897 640 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 32 - -
Sto9g1897 640 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 100 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1897 Sto-Chr9 23271636 23277995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1897 K18270 - gmx:100798096 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1897 9 23271636 23277995 Sto5g1915 5 14237746 14247330 CCT
Sto9g1897 9 23271636 23277995 Sto9g1897 9 23271636 23277995 ECH