Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1915 ATGGAGGCGCCCTCCTTTGTCTCCAAAGCGAGGACTGCCTTCAATTCTGCGGCTGCGAAAGCGGAGCGTGTTCTCTCCGACTTCAAATCTGATCGAGATCCTGAGAAACAATCGCCCAATGATTTGACAAGGCAAGGAAAAGATGAATCTCCTCAGAACGAGGGCGAGTCAAAGCTCCGCTCTGATTTGAAAAAGTGGAGACCTCCACATATAGGTATAAAGCAGGATTGGCAAGATAGAATAAAGAATATTCGAATAGGGAGAAAAGAGGCTGAAGATAAAGATAAAGTTGGCGATGCGACCATGGCTTTTCAGTTTTATGATGAAAATTTGTACATCCTGAATATGAAAAATGATCTTGAGGCCAAGGTTTCTGAAGCTGTACCCTCGGTTGAAGGCTTAAATGCTGTGACTAAAGACCCGATTCCTCCATCAAATGTGCTGAGGCAGTTGGCAGTAGCTGTTGAGACTGCAAGGAAAACAAGGTCATTGAGAGATTTCATGGCTTCGCCAGCATCTTCACCTGCTAGAGACAGGGCAGGCCTAAGTCTCTCAGCAATGAAGGCTTTAGTATTGGGTGAGAAGCAGGACAAACTTGCAATTGAGTTTAGTAAAGATGAGAAAGTTGGTTTTCTGATTAATTCTCTGTTTGATCCAGAGAGAGAATTCCTCAGAAGGAAGATCAACTCTAATTCAGAGGAAACTTCCGTAACATCTTTGCCAAGAGAAATTCGTGGTGCTCCTCTTGAAAGCATAGTTGTTAAGATAGCTGAAATCATTGGAAACTTCAGAAGCCTGCGAAAGATGGTTTTGTTTTGGTGCAGGGTTGTTGTTGAAgTGAGAAAACTTTGGTCTGAGGAGAAACATATACCCGGGATCCCTTTGGATGAGATTCCAGATCTGAAGTCATGTCTtttatatcaacaatttcaagtAATTAATTGTTGCATCTCTCGAAAAAGTCGCCGTCTTATTGCCACTGAATCTCTGGACTCTTTGATGGAAGGTAGTTCAATTGTTAAAGAATCAACCAACCATAGTAATGGCATTCCTGCAAACCCTCCTCTATATGCTAGATTAAGTACGGGGGAGCTTGTTCTTCGACTTGGTGCTGATTGCCCATCTGGAGATCTGACCTTGTTAGAAACTGGCGAGCCTGTGTACTCTCCTATCATGCAGGAAGGACCTTTGCTTACGGAAGATCTTATCAAAGAAACGGAGGAGTTTGTGTTACGGACTGGGAGTGTTGGTGCTGGGTGCTCTCAACTTCTCTCTGATATGCAGGCTTTCAAGGCTGCAAACCCTGGTTGTATTTTAGAAGATTTTGTAAGATGGCACTCTCCACCTGATTGGACAGAATCTGAACAAAGTACTGATGCTAAAGATTCTTCTGAAGGTGGTGAGACTGGTGAGCCATTGTCCACCAGAGTATGGAAAGAATGTAATTTGTGGCGTGAACTGTGGGAAACGTCTAAACCTGTACCAGCTGTTAAACAGGCGCCTCTCTTTGATGAGGATTTGGCAGCGGAGGGCATCCTGAATGCTTTTGAGGACATTCAGCCTTCTGAGCTTTTTGAACAGTTGTTTGTTTCTTTActtggtttaggatttgcaaTTGCTGAATCAATGCTGTCTGGCAACAATGATTTTTCAAAGTTGTTCTGTGATTGCAAGGAGTACATAGTTGTCACCTGTCAAAGAAGCTGTTGGAGTGAGAAAGTTGATGAACTATGCCAGGTATATGAAACAGTGGAAAAATTGTTAACAAATCCTGAGGAAGCGCGAAAGATGATCAAGCAGGCAGAAGAATCAGCTGCAACAACTGGTGAACCTAAGCGTGGGTTTAAGAGGCTTGGCTTTATATTTGGTGGCAAAGACAAAGCAAGGAAAAAACCCGTCTCTGAAGACCAGACAGACTCAGACGACAACCCGATTCGGCAATCCTTTTCAAGTTTCTTTGACAACAAGTCATCAAAAAATGCAAAGAAACCTCCCAAGTCTGAAGACGCTTCCCCTGCCAGGAAATCTTCCTGTTCCGAAAGTGATGGGAAAGTTGTTTCGGCAAAATTCTTATga 2076 0.4258 MEAPSFVSKARTAFNSAAAKAERVLSDFKSDRDPEKQSPNDLTRQGKDESPQNEGESKLRSDLKKWRPPHIGIKQDWQDRIKNIRIGRKEAEDKDKVGDATMAFQFYDENLYILNMKNDLEAKVSEAVPSVEGLNAVTKDPIPPSNVLRQLAVAVETARKTRSLRDFMASPASSPARDRAGLSLSAMKALVLGEKQDKLAIEFSKDEKVGFLINSLFDPEREFLRRKINSNSEETSVTSLPREIRGAPLESIVVKIAEIIGNFRSLRKMVLFWCRVVVEVRKLWSEEKHIPGIPLDEIPDLKSCLLYQQFQVINCCISRKSRRLIATESLDSLMEGSSIVKESTNHSNGIPANPPLYARLSTGELVLRLGADCPSGDLTLLETGEPVYSPIMQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTESEQSTDAKDSSEGGETGEPLSTRVWKECNLWRELWETSKPVPAVKQAPLFDEDLAAEGILNAFEDIQPSELFEQLFVSLLGLGFAIAESMLSGNNDFSKLFCDCKEYIVVTCQRSCWSEKVDELCQVYETVEKLLTNPEEARKMIKQAEESAATTGEPKRGFKRLGFIFGGKDKARKKPVSEDQTDSDDNPIRQSFSSFFDNKSSKNAKKPPKSEDASPARKSSCSESDGKVVSAKFL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1915 691 MobiDBLite consensus disorder prediction 643 658 - -
Sto5g1915 691 MobiDBLite consensus disorder prediction 628 642 - -
Sto5g1915 691 Pfam Rab3 GTPase-activating protein catalytic subunit 368 517 IPR026147 -
Sto5g1915 691 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 684 - -
Sto5g1915 691 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 684 IPR045700 GO:0005096|GO:0043547
Sto5g1915 691 MobiDBLite consensus disorder prediction 659 675 - -
Sto5g1915 691 Coils Coil 74 94 - -
Sto5g1915 691 MobiDBLite consensus disorder prediction 448 472 - -
Sto5g1915 691 MobiDBLite consensus disorder prediction 23 65 - -
Sto5g1915 691 MobiDBLite consensus disorder prediction 628 691 - -
Sto5g1915 691 MobiDBLite consensus disorder prediction 24 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1915 Sto-Chr5 14237746 14247330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1915 K18270 - gmx:100818643 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1897 9 23271636 23277995 Sto5g1915 5 14237746 14247330 CCT
Sto5g1915 5 14237746 14247330 Sto5g1915 5 14237746 14247330 ECH