Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0400 ATGGAGTTTGGGAAGACTTATGTTGTGAGGCCTAAGGGAAAACATCAAGCCACTATTGTTTGGTTACATGGTCTTGGTGACAATGGTTCCAGCTCATCTCAGCTTTTAGAATCTCTTCCTCTTCCAAATATAAAATGGATTTGCCCTACTGCTCCTACACGTCCTGTGGCTGTACTTGGTGGTTTTCCTTGCACTGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGTCCAGAAGATTGGGAGGGTTTAGATGCCTCAGCTTCACACATTGCCAATTTGTTGTCAACTGAGCCAGCTGATGTGAAAGTTGGCATTGGAGGATTCAGCATGGGTGGAGCAACAGCACTATACTCTGCAAGTAGTTTTGCCATGGGAAGGTATGGAAATGGAATTCCATACTCTCTCAACTTAAGAGCAGTTATTGGACTAAGTGCCTGGCTTCCAGGATCAAGGAGCTTGAGGAACAAGATAGAGGTGTCACATGAAGCAAGAAGAAGAGCAGCTTCATTGCCCATTTTGATGTGCCATGGAATCAGTGATGATGTAGTTCCCTTCAAATATGGAGAAAAATCAGCCCAGTCCTTAAGTTCAGCAGGGTTTCGATACATCACATTTAAATCCTATGATGGAATTGGGCATTATACAGTTCCTAGAGAGATGGATGAGGTGTGCAATTGGCTAAGCTCAAGGCTGGGGCTTGAGGGATACTCATAA 717 0.4421 MEFGKTYVVRPKGKHQATIVWLHGLGDNGSSSSQLLESLPLPNIKWICPTAPTRPVAVLGGFPCTAWFDVGELSEDGPEDWEGLDASASHIANLLSTEPADVKVGIGGFSMGGATALYSASSFAMGRYGNGIPYSLNLRAVIGLSAWLPGSRSLRNKIEVSHEARRRAASLPILMCHGISDDVVPFKYGEKSAQSLSSAGFRYITFKSYDGIGHYTVPREMDEVCNWLSSRLGLEGYS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0400 238 Pfam Phospholipase/Carboxylesterase 7 229 IPR003140 GO:0016787
Sto9g0400 238 Gene3D alpha/beta hydrolase 1 233 IPR029058 -
Sto9g0400 238 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 237 - -
Sto9g0400 238 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 237 - -
Sto9g0400 238 SUPERFAMILY alpha/beta-Hydrolases 7 232 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0400 Sto-Chr9 3915176 3919477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0400 2 236 Acyl Lipid Metabolism Gene Families AT3G15650 77.447 1.43e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0400 K06130 - gmx:100798395 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0400 9 3915176 3919477 Sto1g0192 1 1351041 1354161 CCT
Sto9g0400 9 3915176 3919477 Sto1g0192 1 1351041 1354161 ECH
Sto3g1754 3 13636542 13642727 Sto9g0400 9 3915176 3919477 ECH
Sto9g0400 9 3915176 3919477 Sto9g0400 9 3915176 3919477 ECH