Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0192 ATGTGCTCTTCTCTGCTTGGATTCTCTCTGCTCATAAAGGGTAGTAGAACTGCTAGAAGAAGTTTTGAGTTTGGGAAGACACATGTAGTGAGGCCAAAAGGAAAGCACCAAGCTACTATAGTTTGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAGCTCCTGGAATCCCTTCCACTTCCAAATATAAAATGGATCTGCCCTACTGCGCCAACTCGTCCTGTGGCAATACTTGGTGGTTTTCCCTGCACTGCATGGTTCGATGTTGGAGAACTTTCAGAAGAAGGTCCAGATGATTGGGAGGGTTTAGATGCCTCAGCAGCACACATTGCCAACTTATTGTCAACTGAGCCAGCTGATGTGAAAGTTGGAATTGGAGGATTCAGCATGGGTGCAGCAACAGCCATATACTCTGCAACTTGTTTTGCCATGGGAAGGTATTCAAATGGCATACCATACCCTCTCAACATAAGAGCTGTTGTTGGACTAAGTGGTTGGCTTCCAGGATCAAGGAGCTTGAGGAACAAGATTGAAGTGTCCCACGAATCGAGAAGGCGAGCTGCTTCATTACCTATTTTGCTGTGCCATGGAATCTGTGATGATGTTGTCCTCTACAAATATGGAGAGAAATCAGCCCAAGCATTGAGTTCAGCCGGATTTCGATACATCACATTCAAATCCTATGATGGGCTTGGTCATTACACAGTTCCTAGAGAAATGGATGAGGTGTGTAATTGGCTTAGCTCAAGGCTAGGGCTTGATGGAACCTCATAA 780 0.4538 MCSSLLGFSLLIKGSRTARRSFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEEGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAATAIYSATCFAMGRYSNGIPYPLNIRAVVGLSGWLPGSRSLRNKIEVSHESRRRAASLPILLCHGICDDVVLYKYGEKSAQALSSAGFRYITFKSYDGLGHYTVPREMDEVCNWLSSRLGLDGTS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0192 259 Pfam Phospholipase/Carboxylesterase 27 250 IPR003140 GO:0016787
Sto1g0192 259 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 13 258 - -
Sto1g0192 259 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 13 258 - -
Sto1g0192 259 Gene3D alpha/beta hydrolase 18 254 IPR029058 -
Sto1g0192 259 SUPERFAMILY alpha/beta-Hydrolases 28 253 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0192 Sto-Chr1 1351041 1354161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0192 16 257 Acyl Lipid Metabolism Gene Families AT5G20060 67.769 2.65e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0192 K06130 - gmx:100781212 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0400 9 3915176 3919477 Sto1g0192 1 1351041 1354161 CCT
Sto9g0400 9 3915176 3919477 Sto1g0192 1 1351041 1354161 ECH
Sto3g1754 3 13636542 13642727 Sto1g0192 1 1351041 1354161 ECH
Sto1g0192 1 1351041 1354161 Sto1g0192 1 1351041 1354161 ECH