Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g0388 ATGAAGAATCAATCCCAACCCGAATCGAAACCCTCATCCCAATCGGAAGGATTGATCGACGACGCCTGCATCCTCGACATCGACTTCTTCGTCAAGACACTCTCCGGCATCAAATCCAAAGGCGTATGCCCCGACCTAATCGCCTCCATCATCACCCACTACGCCGCCAAATGGCTCCCAGACGACCTCTCCTCAAACGACGCCGTCCAGCCCCAGAGCGTCGTCGCCGTCTCGTGGATGAAGAAGCGCTTCTTCGTGGAAACCCTAATCGGCGTCCTCCCTCGGGAGAAAACCTCGATCCCCTGCGATTTCCTCCTCCGCCTCCTCCGCACGGCCAACATGGTGGGCGTGGGGCCCACATCCCGACGGGAGCTGGAGAAGCGGATCTCGTGGCGGCTGGAGGAGGCGTCGTTGAAGGAGCTGATGATCCCTTCGTTCGGCCTCGGCCGCACGTGCGGGACGGCGTTGGATGTGGAGGTGGTGATTAGGTTGGTGAAGGGGTTCGTGGGGTTGgatggtagtagtagtagtgagGCGGCGATGCTTAAAGTGGCTAAGCTCGTTGATTTCTATTTGGCTGAAGCGGCCATGGATGCCAATTTGAGCTTGTGTGAGTTCGTTACGCTCGCTTCGGCTCTTCCGGCGCACGCTAGAGCTACGGATGATGGCTTGTATAGAGCTGTGGATACTTACCTCaaaGTGCATCCAGGGTTGTCGAAACAAGAGAGGAAGGGTCTGTGTAGGCTAATAGATAGTGGAAAGCTCACACTGGAGGCCTCACTTCACGCAGCTCAGAACGAACGCCTGCCTGTTCGAGCAGTGATCCAAGTCCTATTCTCCGAGCAGACCAAACTCCTCACCCGCCACATGGACCGGGGGCTCGAGCAGCCGGCGCGGTGCGTGTCGAAGCGCGAGATGATGAACGGCCAGCAAATGGAGATGAAGAAGCTGAGAGAAGATGTTGTGAGGCTTGAAGGGCAGTGCAATGCGCTGCAAGTGCAGATGGAGAGGATGATGGTggagaagaagacgaagaagatgGGGGGGATGTTCAAGTGGAGGAGAAAGCTTGGGATGAGTAAGAGTGTGATGGGGGttgagaagaaggaagaaggtgatgatggtgatgatggggTTGAAGAGGAAAGAGAAACACCTATGGACATGAAAGCAAGACTGGTCAAGGGTAGAAGAAGTCACAAGTGGAGAAGATCCATATCTTGA 1224 0.5221 MKNQSQPESKPSSQSEGLIDDACILDIDFFVKTLSGIKSKGVCPDLIASIITHYAAKWLPDDLSSNDAVQPQSVVAVSWMKKRFFVETLIGVLPREKTSIPCDFLLRLLRTANMVGVGPTSRRELEKRISWRLEEASLKELMIPSFGLGRTCGTALDVEVVIRLVKGFVGLDGSSSSEAAMLKVAKLVDFYLAEAAMDANLSLCEFVTLASALPAHARATDDGLYRAVDTYLKVHPGLSKQERKGLCRLIDSGKLTLEASLHAAQNERLPVRAVIQVLFSEQTKLLTRHMDRGLEQPARCVSKREMMNGQQMEMKKLREDVVRLEGQCNALQVQMERMMVEKKTKKMGGMFKWRRKLGMSKSVMGVEKKEEGDDGDDGVEEERETPMDMKARLVKGRRSHKWRRSIS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g0388 407 MobiDBLite consensus disorder prediction 363 407 - -
Sto9g0388 407 ProSiteProfiles NPH3 domain profile. 16 284 IPR027356 -
Sto9g0388 407 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 6 407 - -
Sto9g0388 407 Coils Coil 307 341 - -
Sto9g0388 407 Pfam NPH3 family 19 260 IPR027356 -
Sto9g0388 407 PANTHER OS12G0117600 PROTEIN 6 407 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g0388 Sto-Chr9 3807088 3810966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g0388 12 338 EF-hand Containing Proteins AT3G44820 33.333 4.75e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g0388 - - dzi:111274480 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0388 9 3807088 3810966 Sto1g0201 1 1417471 1420649 CCT
Sto9g0388 9 3807088 3810966 Sto9g0388 9 3807088 3810966 ECH