Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0201 ATGAAGAATCAatcccatcatcatcatccagaCCAACCCATCACTTTCACCGCAAAATCCCCCTCCCAATTCTCCTCCGAATGCTGGTTCGACGACGCATGCATCCTCGACATGGACTACTTCGTCAAAACCCTCTCCGGCATCAAAGCGAAAGGCGTCCGCGCCGACCTAATCGGCTCCATCATCACCCACTACGCCTCCAAATGGCTCCCGGACCTCTCCGACGCAAACGACGTCGTCGCCGACAGAGGAACCCTAACTCAATTCGAAGAATCTCCCGAGAGCGTGACCGCTCTATGGATGAAGAAGCGATTCTTCGTGGAAACCCTAGTAGGCGTTCTGCCTCCAGAGAAGGACTCGATCCCCTGCAATTTCCTGCTCCGGCTCCTCAGAACGGCGAATATGGTTGGGGTAGAGATGAATTACAGGTGGGAATTGGAGAAGAGGATATCGTGGCAGCTAGATCAGGCGTCGCTGAAGGAGATAATGATACCGTCGTTCAGCCACACGTGTGAGACTCTGTTGGATATGGAGCTTGTGATTCGGTTGGTGAAGAGGTTCGTGGGGTTGGACGGcggcggtggcggtggtggtggtgatggcgGTGGAGGGAAGATGAGTGGGGTTGCGCTTGTGAAGGTGGCGAAACTGGTGGATTGCTATCTTGCTGAAGCGGCTGTGGATGCTAATTTGAGTTTGTCTATGTTCGTTGAGCTTGCGGGAGCTCTGCCTCCACATTCAAGAGCTACTGATGATGGATTGTACAGAGCCATTGACACTTACCTCAAAGCACATCCAGGGGTATCAAAGGGTGAAAGGAAAGGTCTGTGCAAGCTAATTGATTGCAGGAAACTAACCCCAGAAGCCTCACTCCACGCAGCTCAAAACGAACGGTTACCAGTAAGAGCAGTGATTCAAGTTCTATTCTCAGAGCAAACGAAGCTGAATCGGCACATTGATTGGAGCACTGGGTCCTTCAGTGGGAGCAGAAGCCCAAATTGTGGGCTGGATTTGCCTGCTCGTTCTCTGTCAAAGCGTGAGATGTATGCGCAGCAAATGGAGATAAGGAAGCTGAAGGAGGATGTGTATAGGCTTCAGAGTCAGTGCAGTATGATGCAAATGCAGATGGAGAGGATGATGATGGATCAGAAGAGTAAGAAGGGGTTGTTGTTTAAATGGAAGAAGTTTGGGATGGGTGCGTTTAGTAAGAGTACTGCTTCTGTGGAGAAGAATGTTTtggaagaaggggaagctggGTTTGGAAGACAAACGCCTATTGATGTTAAAACTAGCAGGTTGGTTAAACCGAGGACTCCTCACAAATGGAGAAAGTCCATGTCTTGA 1344 0.4732 MKNQSHHHHPDQPITFTAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSDANDVVADRGTLTQFEESPESVTALWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEMNYRWELEKRISWQLDQASLKEIMIPSFSHTCETLLDMELVIRLVKRFVGLDGGGGGGGGDGGGGKMSGVALVKVAKLVDCYLAEAAVDANLSLSMFVELAGALPPHSRATDDGLYRAIDTYLKAHPGVSKGERKGLCKLIDCRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHIDWSTGSFSGSRSPNCGLDLPARSLSKREMYAQQMEIRKLKEDVYRLQSQCSMMQMQMERMMMDQKSKKGLLFKWKKFGMGAFSKSTASVEKNVLEEGEAGFGRQTPIDVKTSRLVKPRTPHKWRKSMS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0201 447 ProSiteProfiles NPH3 domain profile. 27 314 IPR027356 -
Sto1g0201 447 PANTHER OS12G0117600 PROTEIN 14 447 IPR043454 -
Sto1g0201 447 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 14 447 - -
Sto1g0201 447 Pfam NPH3 family 28 290 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0201 Sto-Chr1 1417471 1420649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0201 26 315 EF-hand Containing Proteins AT3G44820 36.842 4.84e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0201 - - gmx:100777676 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0388 9 3807088 3810966 Sto1g0201 1 1417471 1420649 CCT
Sto1g0201 1 1417471 1420649 Sto1g0201 1 1417471 1420649 ECH